Gene Acel_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1930 
Symbol 
ID4486607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2183315 
End bp2184163 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID639730721 
ProductABC-2 type transporter 
Protein accessionYP_873688 
Protein GI117929137 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG TTGAGTACGA AGCGGATTCG ACCTGGCGGA GCGCCGTGTC CCGTCGTACG 
ACGGGTCAGA AACTCCGTGA CCTCTTTGCC GCGTACCTGC GGTTGGACGT GATTGAAGAG
ATCATGTTTC CGGCGAGCAA TGCGCTGGCG TATCTCGCGC TGGTGGTACC TGCCTTCATG
TACTATTTCC AGTCGATCTT TTTGCATACC CGGTCCCAGT ACATGTCCAT TTTGATCGGA
GTGGCGGTAG CGGCGGGCCT GCAGGAGGCC CTTACCGGCT TGACGACGCG ACTCCAGTTT
GCGCAGGAGC GGGGTGTCTT GGAGACGTAC CTCATCGAGC CGATCTCCTG GCGGCTGATA
CCTCTTGGTA TGAACGTGTG GAAGTCGTTC GTCGGAATCG TGATCACGCT CATCACCATC
GCCATCGGCT GCGCCTTGGG GGGTCGAATT GACTTCTCCG GGCTGCCATT GTTCTTCGTG
CTTCTGCTGC TCGGCGTCCT CGCGTCCAAT GGCCTGGGAT TGTTCGCTGC CAGCTTTCTT
ATCCTCTTCA AGCGGGGCTC GCCGGTAATG GCGGTGTACG GATTGCTGGG CGCATTGGTC
GGCGGCTCAC TCTTTTCGAT CACAGTCTTG CCGCCGGCGA TACGCTGGGC GAGTTACTTG
GCGCCGCAAG CCTACGTGAT CAGTGGAGCG CGTAGTCTAC TGACCCCCCA TGCCGGTGCC
ACGGCCATGC CGCTCTGGCT GCCCTTCGTC GTTCTCGGGC TTGCCTCGGT CCTGTCTATT
ATCACCGGGC TCTGGGTATT TGAGCGCGCT CTGCACCGCG CGCAAGTTAT GGGCATTCTC
GGAACGTAG
 
Protein sequence
MNLVEYEADS TWRSAVSRRT TGQKLRDLFA AYLRLDVIEE IMFPASNALA YLALVVPAFM 
YYFQSIFLHT RSQYMSILIG VAVAAGLQEA LTGLTTRLQF AQERGVLETY LIEPISWRLI
PLGMNVWKSF VGIVITLITI AIGCALGGRI DFSGLPLFFV LLLLGVLASN GLGLFAASFL
ILFKRGSPVM AVYGLLGALV GGSLFSITVL PPAIRWASYL APQAYVISGA RSLLTPHAGA
TAMPLWLPFV VLGLASVLSI ITGLWVFERA LHRAQVMGIL GT