| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1882 |
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| Symbol | |
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| ID | 4486139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 2127448 |
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| End bp | 2129613 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639730672 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_873640 |
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| Protein GI | 117929089 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.755669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGTGCA GTGTGACGGA CCCGGACTCT CCGCCGGATA AAGGCGGCCA GGAATCGTCG
CATGACGACA CAGTGGGCGA CGAGGCTACG ACGGCCGCCC GGCCGGCGTC CCCGGAAGAC
GTTGACGCCC ACCTGGTCAT CGACTCTCTG GTGGATGCTG TTCTCGTCGT CGCTCCCGAC
GGTCGGATTG TGCTGGCGAA TTCGGCGGCT GAGAAACTCC TCGGTGCGGA ACCGGGAAGC
CTGAGCGGCG CTCCCCTTCT TGACTTCGTT CCGCAGCGAT ATCAGCGCGC GCACTGCGCG
GGATTCGAGC GTTACGTCCG AACCGGCGAA GGCCGGCTGC CGGCGGGCCA GGCGGTCGAC
GTGGCAGCCA GACGCCGGGA CGGTGTGGAA ATTCCGGTTG AAATCCGATT CGGCCGGGCC
GGGAAGCCGA CTCCGGAGGG CTTTTCGGTG GTCGGCGTCC TGCGCGAAGT CACCGAGCGG
ATTCGGCTCG AGCGTGCGGC GCTGCTCTCA CGCTATTTGC AGGCCGTCGT CGAGGCCGCG
CCGGATGGCG TTATCGCGTG GTCGCCGGAT CTCACGATCC TGGCGGTGAA TCGGCGATTC
ACTGAGATGT GCCGGCTGCC AAGCGAGGCG ATTCCTGTCG GCGGCGACGT CGTCGAGCTG
CTGCAGAGGT ACGGCTCGTT ACTCCGTGAA CCACAGCGTC TGCTGGACGC TTTTGAGTAC
GCACGCCGCA ATCCGACCGA AGCGCAGAGC CTGGAACTCA CCCTTGCCGA TGGGCGGATT
GTCGAAACGT ACGGGGCGCC CATCACCGAC GAGAGTGGGA CGCTCCTCGG GCGGGTCTGG
TACGTGCACG ATGCGACCGA ACGACGCGCG GCCGAGGCAC ACCGCGACCG GTTGCTCCGC
GAGCTTGCCG CCGTACAGCG TGCTCAGCAG TTCTTGCTCG ACGCGTCGAC AGTCTTGGCG
CGCGTCAGCG GATTCTCCGA GTCGCTGCAC GCGCTGGCCG CGGCCGCCGT GCCGGCCCTC
GGTGACATCT GCATCGTCGA CGTCCTGGTG GATGACGGCC GGCGCATCGA GCGGGTCGCG
GCGGTCCACG CGGACCCTAC CGCCCAGCCC CTGGTGGATG ACCTGCGACG GCGTTTCCCG
CCGCGGCTGG ACGGCGACAA TCCGGCCGCC CAGGTGCTGC GTGACGGCGT GTCTCGCTGG
GCCGCGGAGA TGAGCGACGA CTTCCTGCGG GCGACGACAC GCAATGAGGA GCACTACCAA
TTGGTCCGTG CGTTGGGATA CACCAGCTTT ATCACGGTGC CCATGATTGC GGACGGTCAG
GTGCTCGGGA GCATCACGCT GGTGAGCACC AATTCGCACC GGCGTTTCAC CGACGAGGAC
GTGAAGCTGG CCGAAGAATT GGCTCGACGG GCGGCGCTCG TCGTGGCCAA GGAGCGCCGC
TATGACGCCG AGCGCCGTCT CTCCCACAAC CTGCAGGCGA GCCTGCTCCC GAGCGATCTT
CCGGTTTTCC CGGGTGTTGA TTATGCGGTC TGTTTCCAGC CCGGCACCCG TGACGCCGAA
GTCGGTGGCG ATTTCTGGGA TGTCACCACC ATGCCGGACG GCGAGGTCGC CATCATGGTC
GGCGACGTGG CCGGGCACGA CATGCAGGCC GCGGCGATGA TGGCCCAATT GCGTGCGGCA
TGCCGGGCCA TCCGCGCCGA GACGCGTGGG CCGGACGAGC TCGTCGCCCG GCTGCACGCC
CATTGGGATC AGCTGGGTCT GGCGCGGATG GCGAGCGCGG TTTTTGCCCG ACTACGCCCA
TGGAGCGGAT TGTTGCGGGT TGCCTCGGCG GGCCATCCGC CGCCGCTCAT CGTCGAGGAC
GGTCGGCCAT GGTTCGTTCC GATCGAGCCG AGTACGCCCT TTGGCGCCCC AGGCGGCGGA
GCGTCGCTCT GGCAGGGCAC CCTCAGCCCA GGCGCGGTTG CTGTCTTCTA CACCGACGGC
CTCGTCGAGG ACCGGCATCG CGACATTGAC GACGGCATGG CCCGCCTCGC CGTGGTGGTC
ACCGAGCATT GGACCGAGCC GGCGAGTGCG ATCGCTGATC ACGTGATCAG CGCGTTGCTG
GGCCCGGAAC GAGCCGACGA CGTCGCTGTT CTCGTCCTGC GTTGGCTGGG TCCAATCTGT
TCGTGA
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| Protein sequence | MRCSVTDPDS PPDKGGQESS HDDTVGDEAT TAARPASPED VDAHLVIDSL VDAVLVVAPD
GRIVLANSAA EKLLGAEPGS LSGAPLLDFV PQRYQRAHCA GFERYVRTGE GRLPAGQAVD
VAARRRDGVE IPVEIRFGRA GKPTPEGFSV VGVLREVTER IRLERAALLS RYLQAVVEAA
PDGVIAWSPD LTILAVNRRF TEMCRLPSEA IPVGGDVVEL LQRYGSLLRE PQRLLDAFEY
ARRNPTEAQS LELTLADGRI VETYGAPITD ESGTLLGRVW YVHDATERRA AEAHRDRLLR
ELAAVQRAQQ FLLDASTVLA RVSGFSESLH ALAAAAVPAL GDICIVDVLV DDGRRIERVA
AVHADPTAQP LVDDLRRRFP PRLDGDNPAA QVLRDGVSRW AAEMSDDFLR ATTRNEEHYQ
LVRALGYTSF ITVPMIADGQ VLGSITLVST NSHRRFTDED VKLAEELARR AALVVAKERR
YDAERRLSHN LQASLLPSDL PVFPGVDYAV CFQPGTRDAE VGGDFWDVTT MPDGEVAIMV
GDVAGHDMQA AAMMAQLRAA CRAIRAETRG PDELVARLHA HWDQLGLARM ASAVFARLRP
WSGLLRVASA GHPPPLIVED GRPWFVPIEP STPFGAPGGG ASLWQGTLSP GAVAVFYTDG
LVEDRHRDID DGMARLAVVV TEHWTEPASA IADHVISALL GPERADDVAV LVLRWLGPIC
S
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