| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1879 |
|---|
| Symbol | fumC |
|---|
| ID | 4485277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 2123940 |
|---|
| End bp | 2125358 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639730669 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_873637 |
|---|
| Protein GI | 117929086 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG GTGCGTTGGG TGACGCTTTT CGTGTCGAGC ACGATTCGAT GGGTGAGGTC
CGCGTTCCGG CCCATGCCAA GTGGCGCGCA CAAACACAAC GCGCGGTCGA GAATTTCCCG
ATTTCCGGAA TGCGGATCGA CCGTGAGCTG ATTGCCGCTC TCGCGGCCAT CAAAGGCGCA
GCCGCACGCG TCAACGCCGA ACTCGGCGTC ATCGACCCCG ATGTGGCGAG CGCGATTGCG
GAGGCGGCCG AGGAAGTGCG CCACGGTCAG TGGGACGACC ATTTCCCCGT CGACGTCTTT
CAAACCGGCT CCGGTACGTC AAGCAACATG AATGCCAATG AAGTCATCGC GACTCTGGCC
GCGGAACGGC TTGGTCGCCC GATTCATCCC AACGACCACG TGAACGCCTC GCAGTCATCG
AACGACACCT TTCCATCGGC CATTCACATC GCGGCGTGCC GGGCCGTCAC CGGCACCCTC
CTTCCCGCGT TGGAGCATCT CGCCGCCGCA CTCGAACGCA AAGCAACGGA GTTCGCCGAC
GTCGTGAAGG CCGGACGCAC CCACCTGATG GACGCCACAC CGGTCACGCT CGGACAGGAA
TTCAGCGGAT ATTCGGCCGC CGTCCGTTAC GGGATGGAAC GGCTGCGGAG CGTGCTGCCG
CGACTTGGCG AGCTGCCGCT CGGCGGTACG GCGGTGGGAA CGGGAATCAA TACTCCTCCC
GGATTCGCCG CACGGGTCAT CGAACGGCTC GCGTCCCAGC TCCAGTTGCC GCTCACCGAA
GCACGCAATC ATTTTGAAGC CCAGGGCGCC CGCGATGCGC TGGTGGAAAC GAGCGGCATG
CTGCGGGTTG TCGCGGTCAG CCTGTACAAA ATCGCCAATG ACTTACGGCT GATGGCCTCC
GGTCCGCGCA CCGGACTCGC CGAGATCCAC CTGCCGGACC TGCAGCCAGG TTCATCCATC
ATGCCCGGGA AGGTGAATCC CGTCATCCCG GAAGCGGTCT GCCAGGTCGC GGCTCAAGTC
ATCGGCAACG ACGCGACGGT GGCGTTCGGC GGCGCCGCTG GCACCCTGGA ACTGAACGTG
ATGCTTCCGG TTATTGCCCG CAATCTGCTG GAATCGATCC GGCTGCTCTC CAACGTCGCT
CGTCTCTTTG CGGATCGGTG CGTCGCTGGT ATCACCGCGG ACGTCGAACG CTGCCGCCGA
TACGCCGAAT CGTCGCCTGC CATCGTTACC CCGCTGAATC GGTACATCGG ATACGAGGCG
GCGGCGAAGG TGGCGAAATA TGCGCTGGAG CACGACACGA CGATCCGGCA GGCGGTCATT
GACTGCGGAT TCGTTGCCAA CGGGCAGATC AGTGAAGCCC AGTTGGACCG GGTGTTGGAC
GTTCTCGCCA TGACCGGCCG CCCGGTGACG GCGGATTGA
|
|---|
| Protein sequence | MTAGALGDAF RVEHDSMGEV RVPAHAKWRA QTQRAVENFP ISGMRIDREL IAALAAIKGA
AARVNAELGV IDPDVASAIA EAAEEVRHGQ WDDHFPVDVF QTGSGTSSNM NANEVIATLA
AERLGRPIHP NDHVNASQSS NDTFPSAIHI AACRAVTGTL LPALEHLAAA LERKATEFAD
VVKAGRTHLM DATPVTLGQE FSGYSAAVRY GMERLRSVLP RLGELPLGGT AVGTGINTPP
GFAARVIERL ASQLQLPLTE ARNHFEAQGA RDALVETSGM LRVVAVSLYK IANDLRLMAS
GPRTGLAEIH LPDLQPGSSI MPGKVNPVIP EAVCQVAAQV IGNDATVAFG GAAGTLELNV
MLPVIARNLL ESIRLLSNVA RLFADRCVAG ITADVERCRR YAESSPAIVT PLNRYIGYEA
AAKVAKYALE HDTTIRQAVI DCGFVANGQI SEAQLDRVLD VLAMTGRPVT AD
|
|---|
| |