Gene Acel_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1875 
Symbol 
ID4485273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2120474 
End bp2121724 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID639730665 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_873633 
Protein GI117929082 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.128369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTTA CCTCCTCGGC CGAATCCCCG GTACCGGTAC GGGAAGTCGC GCGGCAGATC 
GGACTCTGGG TCGGCCGGCT CGGTCGCATC TGGGTCGACG GGCAGCTCAC GCAAATAAAA
ATCCGCCCAG GCACGAACAC CGTTTTCTTC AACCTGCGGG ATCCCTCGGC CAACGTCACC
CTGCTCGCCA CCTGCCCGCG TCAGGTCTTC GAGTGCATCG AGCCGAAACC CACGGAAGGT
CTGCGGGTGG CGGTCTTGGG CAAGCCGGAA TTCTACGTGC CGCGCGGCAG TTTGCAGCTC
GTCGTCCACG ACATCCGGCC GATCGGCATT GGCGATTTAC TGGCCCGCCT GGAACGCCTG
AAGAAAATCC TTGCCGCTGA AGGGCTGTTC GCCCCCGAAC GGAAGCGCCC GCTCCCCTTT
CTGCCGCGCG TTGTCGGGCT GATTTGCGGC CGCGGTTCGG CGGCGGAACG GGACGTCGTC
GAGAACGCGC GCCGGCGCTG GCCCGCCGTC CGTTTCGACA TCGCGGCGGT GGCGGTGCAA
GGTCCGTACG CGGTACCGGA GATCGTCGCC GCCCTCCGCC GGCTCGACGA CGACCCCGTG
GTCGACGTCA TCGTCATTGC CCGCGGAGGC GGCAGCGTCG AAGACCTCCT GCCTTTCTCC
GACGAGACCC TGCTGCGCGC GGTCGCCGCC TGCCGCACGC CGGTGGTGAG CGCAATTGGT
CACGAGACCG ACACACCGCT CCTCGACTTC GTCGCCGATG TCGCCGCCTC CACGCCCACG
GACGCCGCCC GCCGGATCGT GCCGGACGTG GCGGAGCAGT ACGCCCAGCT CGCGCAGCTC
GGCGATCGAC TCCGGAACGC ACTGCGACAT CGGATCGACC GGGAGCAACA GGTCCTCGAC
ACGTTGCGCT CCCGGCCGGT CCTGGCACAC CCCGTCCAAG ACATCAACCG GCGTGGCGAG
GAGATTCTGC GGCTGGTGCG CGCCGGGCGG ACCGCGCTGG ACACGGCGAT CCGGGCGGCG
GACGCCGACG CCCGCCACCT CGTCGCTCGT CTGCGGGCGC TCGCCCCGGC GGCAACCCTC
GAACGCGGGT ATGCCATCGT CCTCGACCCC GCCGGCCGGG TCATCCGTGG AGCCGATGAG
GTCCAGACCG GAGACGAGCT CGTCGTCCGG CTCGGCCGCG GCCGGTTGCG GGTCACCGTC
ACGGATGTGG CACCAGCCGA GACGGACCAC CCACTAGGCT CGCTCGCGTG A
 
Protein sequence
MALTSSAESP VPVREVARQI GLWVGRLGRI WVDGQLTQIK IRPGTNTVFF NLRDPSANVT 
LLATCPRQVF ECIEPKPTEG LRVAVLGKPE FYVPRGSLQL VVHDIRPIGI GDLLARLERL
KKILAAEGLF APERKRPLPF LPRVVGLICG RGSAAERDVV ENARRRWPAV RFDIAAVAVQ
GPYAVPEIVA ALRRLDDDPV VDVIVIARGG GSVEDLLPFS DETLLRAVAA CRTPVVSAIG
HETDTPLLDF VADVAASTPT DAARRIVPDV AEQYAQLAQL GDRLRNALRH RIDREQQVLD
TLRSRPVLAH PVQDINRRGE EILRLVRAGR TALDTAIRAA DADARHLVAR LRALAPAATL
ERGYAIVLDP AGRVIRGADE VQTGDELVVR LGRGRLRVTV TDVAPAETDH PLGSLA