Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1815 |
Symbol | |
ID | 4486286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 2057102 |
End bp | 2057878 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639730605 |
Product | short chain dehydrogenase |
Protein accession | YP_873573 |
Protein GI | 117929022 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.644023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTC TCACCGACAA GGTCGTGCTC ATCAGCGGCG GCACTCAGGG GCTGGGTGCG GCGATCGCGC GGGCAGCCGT ACGGGAGGGT GCCGCTGTCG CCGTTCTGGG CAGGCGGGCC GAGCTCGGCG AAGCGTTCGT CCGGGAGTTG GAGAGCAGCG GAGCAAGGGC GGCGTATTTT CGTGCGGACG TGGGCGACGT GGGCCAAGCA CGTGCCGCCG TCGCCCAGAC GATAGAGACT TTTGGGCGCG TCGACTGCCT GGTCAATTCC GCCGGTCTGA CCACGCGGGG TACTCTCCTC GACACCGAGC CCGAGCTCTT TGACGCCCAT GTCGCGGTGA ACCTGCGCGG GCCGTTTTTT CTCATGCAGG CAGTGGTCCG TGACATGCTC GCCCGTCGCG CGCCCGGAAC GATCGTGAAC ATCATTACGT CCTCAGCTCA TGCCGGCCAG CCGTATCTGA CGCCGTACGT CGCGTCCAAA GCCGGCTTGG TGGGTCTCAC CCGCAACGCC GCGTATGCGC TCCGGTGGGA CCGGATCCGT GTCAACGGGC TCAACATCGG CTGGACCGAT ACCGAAGGCG AGGACGCAAT TCAGCGCCAA TTCCACGGCG CCGGCGATGA CTGGCGGGAC CAGGCGGCGA AGAAGCTCCC GATGGGGAGA CTTGCGCGGC CGGACGAAAT CGCGGACTTT GTGGTCTTCC TCCTTTCCGA CCGCAGCGGT GTGGTCACCG GATCTGTCAT CGACTGGGAT CAGAACGTGT TCGGCGGCTT GGATTAG
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Protein sequence | MALLTDKVVL ISGGTQGLGA AIARAAVREG AAVAVLGRRA ELGEAFVREL ESSGARAAYF RADVGDVGQA RAAVAQTIET FGRVDCLVNS AGLTTRGTLL DTEPELFDAH VAVNLRGPFF LMQAVVRDML ARRAPGTIVN IITSSAHAGQ PYLTPYVASK AGLVGLTRNA AYALRWDRIR VNGLNIGWTD TEGEDAIQRQ FHGAGDDWRD QAAKKLPMGR LARPDEIADF VVFLLSDRSG VVTGSVIDWD QNVFGGLD
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