Gene Acel_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1793 
Symbol 
ID4485692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2032007 
End bp2034619 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content69% 
IMG OID639730583 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_873551 
Protein GI117929000 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.63759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.833682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCT TCGAGGAGAT CGTCCGCGAG TTCCTCGTCG AGAGCTACGA AAACCTCGAC 
CAACTCGACC GTGATCTCGT CGCCCTGGAA CAAGAACCCG GATCGCGTGA CCTCCTGCAG
AGCATCTTCC GCACCATCCA CACCATCAAA GGCACCAGCG GCTTCCTCGC GTTCAACAAG
CTCGAAGCCC TGACCCACGC GGGGGAGGGG CTGCTCGCCA AGCTTCGCGA CGGGGGACTC
GAGTTCACTC GGGAGCGTGC CGACGGGCTC CTCGAACTTG TCGACGCCGT TCGGACCATC
CTCGCCGCGA TCGAGACCAC CGGGACCGAG GGCGACGGCG ACTACACGGC GTTGACCGCC
AAGCTCTCCG CGTTGCAGGA ACTGCCGGCC GAGGACGCCG CCGGCAAAAC CCAGTCCGCC
GCGCACCCTG CCCACGCGGC GGATTCGGTC ATCACCGACA GCCCTGCCGA TCCGGGGCGC
AGCGAAGCCG CCGCGGCTGC GCCAGCCGGG GCCGAGACAC CGACGCCCGC TGCCACTCCG
CCGGCTGACG TTCCGGCGCC AGCCGGGGCC GGCAACCCCG ACCAGCCGCC GGAAGCCACG
CCGGCCAAGG CTCGCGGTCG GCGTCCGCCG AAATTGCCTG CGGTCAAGCC GGAGGAGCCG
CGGGTTCCCC TCCTGGGTGA GGTCCTCAAG GAGCAGGCCG CCGTCGACGA CGCCGACCTG
GCCGTCGCTC GCCTCGAACA GGAGCTCGGC GATACCCGGC CGATCGGCGA AATCCTCGTC
GAACATGGTC AGGTGACCAG CGAGCAGGTC CGCGCGGCGC TCGCCGCGCA AGCGGAGGCC
AAGGCAAGCA CGACCCCGCA CACCGTCGCC GAAACGTCCC TTCGGGTTGA CGTCACCCTG
CTCGACACCC TGATGCGGCT CGTTGGCGAG CTTGTCCTCA CCCGCAACCA GATCGTCGCG
ACCGCGGCCA CCCAGTCGGA CTCGGTCATT GCCCGGGCCG CCCAGCGGCT GAACCTGCTT
GTCACCGAGC TGCAAGAGGG CGTCATGAAG ACCCGGATGC AGCCAATCGA CACGGTGTTC
AGCAAGCTGC CGCGGGTCGT CCGGGATCTG GGCCTCGCGT GCGGCAAGCA GGTCCGGCTG
GAGATCGAGG GTCGAGACAC CGAACTCGAC AAGACCATCC TGGAGGCGAT CAAGGATCCG
CTGGTTCACG CCGTCCGGAA CGCCATCGAC CACGGCATCG AAGCACCCGA GGTGCGGCGG
GAACGGGGCA AGCCGACTGA GGGCCGGCTC GTGCTCCGCG CCTACCACGA AGGCGGCCAG
GTCAACATCG AAATCACCGA CGACGGCGCC GGCATCGACC CGCAGCGGGT GGCCGAGCGC
GCGATTCAGG CCGGCTTCGA CGCCGAGCAC GTCCGCCGGA TGAGCCAGCG GGAGCTGATC
AACCTCATTT TTGTGCCCGG GTTGAGCACT GCCGAGACGG TCACGAACGT CTCCGGCCGC
GGCGTCGGCA TGGACGTCGT CCGGGCGAAC GTCGAGCGGA TCGGCGGGAC CGTCGACGTC
ACCAGCGAAC TCGGGGTCGG CACAACTTTG CGGATCAAAA TCCCCCTCAC GCTGGCGATC
ATTCCGGCGC TCACCGTCGA ATGCCGGGGG GAGCGGTACG CGATCCCGCA GGTCAACCTG
GACGAGCTGG TCAGCCTGGA AGGCGACCAG GCCAGTCGGG GGGTGGAATT CCTCTCCGAC
GCCCCGGTCT TCCGTCTGCG GGGCAATCTC ATTCCGCTGG TGTGGCTCGA CCACATCCTG
GGGCTTGGCC GGCCGCCGCG GCCCGGGGAC CCGCTTCCGG AGATCGTGTC CATCGTGGTG
CTTCAGGCGG AGGGACGACG CTTCGGGCTC GTCGTGGACC GCATCCTCAA CACCGAGGAG
ATCGTCGTCA AACCGCTCTC CCGCAAGCTG AAGGAGATCG GCGCCTACGC CGGAGCCACG
ATCATGGGTG ATGGGCGGGT GTGCCTCATC CTCGACGTGC GGGCGCTGGC CCGCCGGGCG
CACGTCGTCC AGGACGCCGA TCACCATGCC GCCACGGAAA GCGCGGACGA CGCCGCCCAT
CGGGTCGGCG GTCCGGAGGC ACTGCTCGTC GTCGCCGTCG GTCACCGCCG GATCGGCATT
CCGCTGTCCA TGGTGACCCG GCTGGAGGAG ATCGACGCCG CTCAGATCGA ACACGTCGGC
CGGCGGCCCG TCGTCCAGTA CCGCGGCCAC TACCTGCCGC TGGCGCGGCT TTCGGACCTG
CTCGGCGAAC CCGCGAGTGA CGGCGAGCGG CTCACGGTCG TCGTGTACAC CCAGGGTCGC
CGCAGCGTCG GGCTTGTCGT GGACACGGTC ATCGACATCG GTGCGGAAAC GCCGGGATCG
CGCGGTGATC TCACTGCTCC GGGCGTCACC GGTGTGGTCG TGGTCGACGG CCGTGTCACC
GAGCTGCTGG ACATGGAAGA AGCAATTCGC GCCGCCGACC CGCAGTTCTT CGAGGCGGTG
GCGGCCAGCG ACGCCGCGGA CGTGTCCGCG TACGACGACT ACGACACGGC GCTGGCCGGG
GCGGGCGAAG GCGCCGCGGG AGGTGACCGA TGA
 
Protein sequence
MEGFEEIVRE FLVESYENLD QLDRDLVALE QEPGSRDLLQ SIFRTIHTIK GTSGFLAFNK 
LEALTHAGEG LLAKLRDGGL EFTRERADGL LELVDAVRTI LAAIETTGTE GDGDYTALTA
KLSALQELPA EDAAGKTQSA AHPAHAADSV ITDSPADPGR SEAAAAAPAG AETPTPAATP
PADVPAPAGA GNPDQPPEAT PAKARGRRPP KLPAVKPEEP RVPLLGEVLK EQAAVDDADL
AVARLEQELG DTRPIGEILV EHGQVTSEQV RAALAAQAEA KASTTPHTVA ETSLRVDVTL
LDTLMRLVGE LVLTRNQIVA TAATQSDSVI ARAAQRLNLL VTELQEGVMK TRMQPIDTVF
SKLPRVVRDL GLACGKQVRL EIEGRDTELD KTILEAIKDP LVHAVRNAID HGIEAPEVRR
ERGKPTEGRL VLRAYHEGGQ VNIEITDDGA GIDPQRVAER AIQAGFDAEH VRRMSQRELI
NLIFVPGLST AETVTNVSGR GVGMDVVRAN VERIGGTVDV TSELGVGTTL RIKIPLTLAI
IPALTVECRG ERYAIPQVNL DELVSLEGDQ ASRGVEFLSD APVFRLRGNL IPLVWLDHIL
GLGRPPRPGD PLPEIVSIVV LQAEGRRFGL VVDRILNTEE IVVKPLSRKL KEIGAYAGAT
IMGDGRVCLI LDVRALARRA HVVQDADHHA ATESADDAAH RVGGPEALLV VAVGHRRIGI
PLSMVTRLEE IDAAQIEHVG RRPVVQYRGH YLPLARLSDL LGEPASDGER LTVVVYTQGR
RSVGLVVDTV IDIGAETPGS RGDLTAPGVT GVVVVDGRVT ELLDMEEAIR AADPQFFEAV
AASDAADVSA YDDYDTALAG AGEGAAGGDR