Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1709 |
Symbol | |
ID | 4484709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1922063 |
End bp | 1922737 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639730499 |
Product | TetR family transcriptional regulator |
Protein accession | YP_873467 |
Protein GI | 117928916 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.400859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0301663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGTG AGGGCCGATC GCTCCAGAGA GAAGAGGCGC AGCGGGGTGC GCAGCGCCGC GGTGCGGAAC TGCGCCGTCA CATCCTCGCA ATCGCCAAAG ACGTCTTCTT GGAAGCCGGC TACGAGCGGA CTTCGATGGA CGCCGTCGCA GCGCGAGCTG GAACGTCTAA GCGTTCGCTG TACGCCCACT TTGAGAGCAA GCAGAAGCTG TTCGACGCGG TGCTGGACTT CGTCCGCGAG TTGTACCTCG GCAAGCTCAG CACCCCGGAC GCGTACGCCG ACGACCCTAC CGAGGCGATC TCGCTATTCT GCGGGCGGTT CCAGCAACTG ATGACTTGGG AGCCTCAGGT ACGTCTTTGT CGGCTGTGCA TCGCCGAGGC TGAGAGGCTA CCGGGCAGCG CATCGGCGTA CTTTGACGCG ATGTTCGTCA AGGCGTACGA CCGGCTGGCC TCCTACCTCT ACGAGCGGTA CCGCGCCCAC GGTATCGACC GGGCCGCCGC AACCTCACTC GCGCAGGATC TGCTGGGTCG CACTGTGCTA CCACGGCTAC TGCGCGCGCT GCTGGGCGTC GAAAGCGCAA TCAAGGGATC CGACTCGCCG AGTGAGAAAG ACATAGCCGC AGACGTCGAC ATAGCGACGA TCCGCGCGAC GGTGTCTACA GTCCTACGCC TCTGA
|
Protein sequence | MTREGRSLQR EEAQRGAQRR GAELRRHILA IAKDVFLEAG YERTSMDAVA ARAGTSKRSL YAHFESKQKL FDAVLDFVRE LYLGKLSTPD AYADDPTEAI SLFCGRFQQL MTWEPQVRLC RLCIAEAERL PGSASAYFDA MFVKAYDRLA SYLYERYRAH GIDRAAATSL AQDLLGRTVL PRLLRALLGV ESAIKGSDSP SEKDIAADVD IATIRATVST VLRL
|
| |