Gene Acel_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1709 
Symbol 
ID4484709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1922063 
End bp1922737 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID639730499 
ProductTetR family transcriptional regulator 
Protein accessionYP_873467 
Protein GI117928916 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.400859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0301663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG AGGGCCGATC GCTCCAGAGA GAAGAGGCGC AGCGGGGTGC GCAGCGCCGC 
GGTGCGGAAC TGCGCCGTCA CATCCTCGCA ATCGCCAAAG ACGTCTTCTT GGAAGCCGGC
TACGAGCGGA CTTCGATGGA CGCCGTCGCA GCGCGAGCTG GAACGTCTAA GCGTTCGCTG
TACGCCCACT TTGAGAGCAA GCAGAAGCTG TTCGACGCGG TGCTGGACTT CGTCCGCGAG
TTGTACCTCG GCAAGCTCAG CACCCCGGAC GCGTACGCCG ACGACCCTAC CGAGGCGATC
TCGCTATTCT GCGGGCGGTT CCAGCAACTG ATGACTTGGG AGCCTCAGGT ACGTCTTTGT
CGGCTGTGCA TCGCCGAGGC TGAGAGGCTA CCGGGCAGCG CATCGGCGTA CTTTGACGCG
ATGTTCGTCA AGGCGTACGA CCGGCTGGCC TCCTACCTCT ACGAGCGGTA CCGCGCCCAC
GGTATCGACC GGGCCGCCGC AACCTCACTC GCGCAGGATC TGCTGGGTCG CACTGTGCTA
CCACGGCTAC TGCGCGCGCT GCTGGGCGTC GAAAGCGCAA TCAAGGGATC CGACTCGCCG
AGTGAGAAAG ACATAGCCGC AGACGTCGAC ATAGCGACGA TCCGCGCGAC GGTGTCTACA
GTCCTACGCC TCTGA
 
Protein sequence
MTREGRSLQR EEAQRGAQRR GAELRRHILA IAKDVFLEAG YERTSMDAVA ARAGTSKRSL 
YAHFESKQKL FDAVLDFVRE LYLGKLSTPD AYADDPTEAI SLFCGRFQQL MTWEPQVRLC
RLCIAEAERL PGSASAYFDA MFVKAYDRLA SYLYERYRAH GIDRAAATSL AQDLLGRTVL
PRLLRALLGV ESAIKGSDSP SEKDIAADVD IATIRATVST VLRL