Gene Acel_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1696 
Symbol 
ID4484696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1906271 
End bp1907290 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID639730486 
Productpolyprenyl synthetase 
Protein accessionYP_873454 
Protein GI117928903 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000054414 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGTT CCCAGCCCCC AGCCGTACTC TCCGCCGTCC GCGATCTCGT GGACCGGCCG 
CTCCGGGAGG CGATCGACCG GCTCGCTCCG AAGATCCGGC GGGTCGCTGC GTATCACTTC
GGCTGGGAAG AAGCCGACGG CAGACCCGGC AACGGCGGCG GAAAGGCGGT TCGGTCTGCC
CTCGCGGTGC TGTCCGCGCA GGCGGCCGGT GCACCCGCCG CGGTCGGCAT CCCGGGGGCG
GTCGCGGTCG AGCTCGTCCA CAACTTCTCG CTGCTCCACG ACGACGTGAT GGACGGCGAT
GAGGAACGGC GGCATCGACC GACCGCCTGG ACGGTCTTCG GCCGGTCGGC GGCGCTGCTT
GCCGGTGACG CCCTCCTCGG CCTGGCGTTC GACGTCCTGC TCGACGCTGA GCACGGCGAC
GCCGCGCAGC GCTGCCTGGG ATCGGCGACG CAAGAACTGA TCGCCGGGCA GTTCGACGAC
CTGGACTTTG AGACCCGGCT CGACGTCAGC CTCGACGAAT GCGTCTCGAT GGCCGGCGCC
AAGACCGCCG CGTTGATGGC CTGCGCATCG TCGATCGGTG CGCGACTCGC CGGCGCGGAC
CCGGCGCTGG TCAACGCGCT GGACGACTTC GGTCGCCACC TCGGCTTGGC GTTCCAACTG
GTCGACGACC TGCTCGGCAT CTGGGGTGCC CCGGAGGTGA CCGGTAAGCC GGTCGGAGCA
GATCTGCGCG CCCGCAAGAA GAGTCTGCCG GTCGTCGCGG CCATGACCTC GGGCACACCG
GCCGGGGAGG AATTACGCAT TCTTTACGGC GGCGAGAAAC TCCACGCCGA CGCCGATGCG
CATGTGGTCG GCCTGGCTGC GGAGCTCGTC GAAGCAGCCG GTGGACGGCG ATGGGCCATG
GAGGAGGCGG ACCGGCGGCT TGCCGCCGCG TGCGCCGCAT TGGACGGCGT TCCGGTCGTT
CCGGCTGCGA AAACCGGCCT CCTCGACATC GCGCGGTACG TAACCAGCCG CGACCACTAG
 
Protein sequence
MTRSQPPAVL SAVRDLVDRP LREAIDRLAP KIRRVAAYHF GWEEADGRPG NGGGKAVRSA 
LAVLSAQAAG APAAVGIPGA VAVELVHNFS LLHDDVMDGD EERRHRPTAW TVFGRSAALL
AGDALLGLAF DVLLDAEHGD AAQRCLGSAT QELIAGQFDD LDFETRLDVS LDECVSMAGA
KTAALMACAS SIGARLAGAD PALVNALDDF GRHLGLAFQL VDDLLGIWGA PEVTGKPVGA
DLRARKKSLP VVAAMTSGTP AGEELRILYG GEKLHADADA HVVGLAAELV EAAGGRRWAM
EEADRRLAAA CAALDGVPVV PAAKTGLLDI ARYVTSRDH