Gene Acel_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1554 
Symbol 
ID4485350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1752884 
End bp1753807 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID639730338 
Productribonuclease H 
Protein accessionYP_873312 
Protein GI117928761 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0977063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCGT CGACGACTGC GCGGCTTGGG CCTGCGCGGG TGCGCAGCGA GCGTCGATCC 
TGCGCAGCTG AGCGTCACCG ACTTGTCGAT CTCTACCGCT ACGAGCGACG GCTGGCTCGG
CTTGGTCTCG AACCGGTCGC CGGGGTGGAC GAAGCCGGCA GAGGCGCGTG CGCCGGTCCC
CTCGTCGTCG CGGCCGTGAT TCTGGGGAGC GATCGGCGGA ACCGCATCGC CGGGTTGGCG
GACTCCAAGC AGCTCACTCC CGCTGCACGC GAGTCGATCT ACAACGAGAT CATCTCCCGG
GCACTAGCGT GGTCGGTTGT GGTGATTCCC TCCTCCGAAG TCGACGAGTT GGGGGTGCAC
GCAGCCAACA TCACCGGGAT GCGCCGGGCG GTCGCCGGCC TTGCGGTCCG GCCCGCGTAC
GTTCTCACGG ACGGCTTCTC CATCGCGGGA TTGAACGCTC CCGGCCTAGC GGTCTGCAAG
GGTGACGAGG CCGTCGCGTG CATTGCAGCC GCGTCCGTCG TGGCGAAGGT GACCCGGGAT
CGACTCATGG TGGAATTGCA CGAAAAGTTC CCGATGTACG AGTTCGCTAC CCATAAGGGG
TATGTGACCG CGGGACACCG CGCTGCGCTC GCCCGCCACG GACCGTGCCC GGAACACCGG
CGCTCGTTCG TGACCGTCCG CCGGGCTGGG GGCCGGATGG AGCTGCGAAT CACCGAGCTG
GCCGACTCCG ACGACTCTCC TGGCTTCGCA TCCGGCCCGG CTGAGGCAGT GCCCGGCCCG
GCGGGCTCGG CCGGGGCCGC GTCCGCGGCG GCTCGTCCCG CGGCGGCGGG GCCGGCTGGC
CGGCTTGTCG ATCAGAATCG TGCGGCTGAC CTGCGCGACA ATGGGGACGT GTCCCGTCCC
GCCGAGCTGC TGGAGATCCC ATGA
 
Protein sequence
MGASTTARLG PARVRSERRS CAAERHRLVD LYRYERRLAR LGLEPVAGVD EAGRGACAGP 
LVVAAVILGS DRRNRIAGLA DSKQLTPAAR ESIYNEIISR ALAWSVVVIP SSEVDELGVH
AANITGMRRA VAGLAVRPAY VLTDGFSIAG LNAPGLAVCK GDEAVACIAA ASVVAKVTRD
RLMVELHEKF PMYEFATHKG YVTAGHRAAL ARHGPCPEHR RSFVTVRRAG GRMELRITEL
ADSDDSPGFA SGPAEAVPGP AGSAGAASAA ARPAAAGPAG RLVDQNRAAD LRDNGDVSRP
AELLEIP