Gene Acel_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1448 
Symbol 
ID4485085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1616962 
End bp1618536 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content68% 
IMG OID639730232 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_873206 
Protein GI117928655 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCC CCCTGTCGCC GCCGCGTTTC TGGCACTCGC TGTCGCTGCG CGGCCGGCTG 
CTGATAGGCG TCCTCGGGCT CGTCGCGCTG GGATTGGCGG TGGCCGCGCT CGCCACCCGG
GCCTTGCTTG CCTCATTTCT GCTGAACCGT TTCGACAATG ACCAGCAGGC CGCGACCCGG
CTCGTCGCCC AGATGGTGTT CGCGGACGGC GGTCCCGGCC GCGCACTCTT CGGCGCGCCG
GGCCGTCGTG GCGCCGTCAC CCGATTGCTG CCGGTCGGCA GTTACGCCGC AGCGGTCACC
GCGGGCGGAC GGGTGGTGGA GCAATTCGGG TACGACGCGA CCGATGCGTG GGTCCCGGTC
TCGGCTGCCG AGGCTCCCCG CCTGCCGAGC GATGTGGCAT CGCGGACCGC GCCGTTTACG
GCGTACACCC CGTCGGGTGC GGCCTACCGG ATGGTCGTCG TCCCGCAGCT TCTGGTGAAT
CCGACCACCG GCGTGCGGTA CACCTTCGTC TGGGGGATGC CGCTGCGCGA GGTCGACGCG
ACGTTGCGGC GGCTCACCAT CGTGGAAATC GCTGTCGCTG TGGGTGTTCT CGTCGGCGTG
GGTTACCTTG CGTGGTTCGT TCTCGGTCTC GGACTTCGAC CCCTGCGAGC AATCGAGCGG
GCCGCGGATG ACATCGCCGC CGGTCAGCTC TCCCGGCGGG TGGCGTATGC CGATACCCGC
AACGAAGTCG GCCGGCTGGG CGCGGCGTTC AACACCATGG TGAGCCGTAT CGAGGAAGCC
TTCGCCGTAC GGGCCGCATC GGAAGAACGG CTGCGCCGGT TCCTGGCCGA CGCTTCGCAT
GAATTGCGTA CGCCGCTTAC CTCGATCCGC GGGTACGCCG AACTCTTCCG GCGCGGCGCG
GCGCGTCGCC CGGATGACCT CGAGAAGGCA ATGCGCCGCA TCGAAGAAGA GGCGACCCGG
ATGGGTGTTC TCGTCGACGA ATTGCTGCTG TTGGCCCGGC TCGACCAAGG ACGCCAGCCC
GTGCGTGAGC CAGTTCTTCT TGCCGAGCTT GTCGCCGACG CGTGCGAGGA TTTCCGGGCA
GCCGCACCGG ACCGGCAGGT GCGCGTGGAC GCCGACCCCG ACGTGGTCGT CAGCGGTGAC
GAATTGCAAC TCCGGCAGGT CGTGACCAAT CTGCTTACCA ACGTGCGGGT GCACACTCCA
CCAGGGACGC CGGTGGACAT TCGCCTCGCC GCTGAGAACG GTTGGGCGGT GCTGGAGGTC
ACCGACTACG GTCTCGGCTT GCCGGCGGCG GATTTGCCGC GGGTGTTCGA CCGTTTCTAT
CGCGCGGATC CGTCCCGCAC CCGCGACCAC GGGGGCGCCG GACTTGGCTT GGCCATTGTG
GCAAGCGTGG TACAGGCACA TGGCGGGCGC GTCGGCGTAC GCAATGTTCC CGGAGCGGGG
GCGTGTTTCC GGGTGGAACT CCCGCTGCTG GCGGAATTCC CATCCAATTC CCAGCTCACG
CCCAACCTTC AGGGGCAGGT GAACCAGATG ATGGAGCCAG ACCTGAAGGA GGCCATGAAT
GACCGAAACA CCTGA
 
Protein sequence
MKSPLSPPRF WHSLSLRGRL LIGVLGLVAL GLAVAALATR ALLASFLLNR FDNDQQAATR 
LVAQMVFADG GPGRALFGAP GRRGAVTRLL PVGSYAAAVT AGGRVVEQFG YDATDAWVPV
SAAEAPRLPS DVASRTAPFT AYTPSGAAYR MVVVPQLLVN PTTGVRYTFV WGMPLREVDA
TLRRLTIVEI AVAVGVLVGV GYLAWFVLGL GLRPLRAIER AADDIAAGQL SRRVAYADTR
NEVGRLGAAF NTMVSRIEEA FAVRAASEER LRRFLADASH ELRTPLTSIR GYAELFRRGA
ARRPDDLEKA MRRIEEEATR MGVLVDELLL LARLDQGRQP VREPVLLAEL VADACEDFRA
AAPDRQVRVD ADPDVVVSGD ELQLRQVVTN LLTNVRVHTP PGTPVDIRLA AENGWAVLEV
TDYGLGLPAA DLPRVFDRFY RADPSRTRDH GGAGLGLAIV ASVVQAHGGR VGVRNVPGAG
ACFRVELPLL AEFPSNSQLT PNLQGQVNQM MEPDLKEAMN DRNT