Gene Acel_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1343 
SymbolruvB 
ID4484768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1496859 
End bp1497962 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID639730123 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_873101 
Protein GI117928550 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0651112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.572707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AGCCCCTCAC CGACCGACCG CCGGCCGTCG ACCTCGGACG GCTCCTCATC 
GACGCCCACG CCGAGAGTGA TGAGCATGCG GTCGAGGCGG CGCTTCGCCC CCGCCGGCTC
GACGAATTCG TCGGCCAGCA GCGTGTCCGC GACCAACTCT CTTTGATCCT CGACGGCGCT
AAGCAGCGCG GCCGGCCGCC GGACCACATC CTCCTCTCCG GACCTCCGGG ACTCGGCAAG
ACAACCCTGG CAATGATCGT CGCGGCGGAG TTGAACACGC CGATCCGGGT GACGAGCGGG
CCGGCGATCC AGCACGCCGG TGACCTCGCC GCCGTCCTCA CCCAGCTCAG CGAGGGCGAG
GTGCTCTTCC TCGACGAAAT TCACCGGATG GCCCGGCCTG CGGAGGAAAT GCTCTACCTG
GCGATGGAGG ACTTCCGGGT CGACGTCGTC GTCGGCAAGG GGCCGGGCGC CTCGGTGATC
CCCCTCGAAC TGGCGCCGTT CACCCTCATC GGCGCGACCA CCCGGACCGG CCTGCTCCCC
GGACCGCTGC GGGACCGGTT CGGCTTCACC GCACGCCTGG ACTTCTACGA GCCGGCCGAC
CTCGAACGGA TCGTGCACCG GTCCGCCCGG CTGCTCGACG TACGCATCAC GCCCGACGGC
GCGGCGGAAA TTGCGCGGCG GTCCCGGGGC ACTCCACGGA TCGCCAACCG CCTGCTGCGA
CGGGTCCGGG ACTATGCCGA GGTGCGGGCC GACGGCGTGA TCACCTGCGA GGTTGCGCAG
GCGGCGTTGG CCGTCTATGA GGTCGACGAA CACGGACTCG ACCGGCTGGA CCGAGCGGTT
CTCGACGCGC TGGTCCGGCG GTTCGGCGGC GGCCCGGTCG GGCTCGGCAC GGTCGCGGTG
GCCGTCGGCG AAGAACCGGA GACAGTCGAG GAGGTCGCCG AACCCTTCCT CTTCCGCGCC
GGCTTCCTGA TCCGCACACC GCGCGGCCGG ATGGCCACGG CCGCCGCGTG GCGGCATCTC
GGCATCACCC CGCCGCCGGA GGCGCTGGGC GCGGCCCAGC TTGCCTTCGA GATCGACCGT
GACGCTGGCG AACCGACCGC GTAA
 
Protein sequence
MTDEPLTDRP PAVDLGRLLI DAHAESDEHA VEAALRPRRL DEFVGQQRVR DQLSLILDGA 
KQRGRPPDHI LLSGPPGLGK TTLAMIVAAE LNTPIRVTSG PAIQHAGDLA AVLTQLSEGE
VLFLDEIHRM ARPAEEMLYL AMEDFRVDVV VGKGPGASVI PLELAPFTLI GATTRTGLLP
GPLRDRFGFT ARLDFYEPAD LERIVHRSAR LLDVRITPDG AAEIARRSRG TPRIANRLLR
RVRDYAEVRA DGVITCEVAQ AALAVYEVDE HGLDRLDRAV LDALVRRFGG GPVGLGTVAV
AVGEEPETVE EVAEPFLFRA GFLIRTPRGR MATAAAWRHL GITPPPEALG AAQLAFEIDR
DAGEPTA