| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1327 |
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| Symbol | |
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| ID | 4486380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1477485 |
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| End bp | 1478423 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639730107 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_873085 |
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| Protein GI | 117928534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.364317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.306318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCCGCA GGACCGGGAT CGGTGATGAC CCGGCTGGCA CGAGCCGGGC AGCGGACGGC
GTGACCCGCC TGGGCGACCC GAGCCCGGCC GCGGACGGCG CTGGGCCGGC CGTTCTCCGC
CGCCGGGCCG CGGTGCTCGG ATCCCCGATT GACCATTCGC TCTCGCCGGT GCTGCACCGC
GCGGCGTACC GGGCGCTCGG GCTGGACTGG TCGTACGACG CGATCGAGTG CGACGAGACC
CGGTTGGGCA CGCTCCTCGA CGAGCTCGGC CCGGAATTCG TTGGCCTCTC ACTGACCATG
CCGCTCAAAC GCGCCGTGCT TCCCCTTCTG GACGACGTGA GCCCGCTGGC CCGTGACGTC
GGCGCGGTGA ACACCGTGAC GTTCCTCGAC GAGCCGGCCC GGCGGCGTCG GGTCGGCGAC
AACACCGACG TCACCGGCAT GGTCGCCGCG CTGCGCGGCG TGAATCCCCG GCCGGCCGCC
GGCCGGGTCG TCGTCCTCGG CGCCGGCGGG ACGGCGGCGG CCGCACTGGC CGCGGTCCGC
GAATTCGGCT GGGCGGAGGT CGGGGTCGTC GTGCGTGACC AAGGCCGGGC TGCGGCGCTG
CGGACCGCCG CGGATCGGCT CGGCGTCCAG CTCACCTTCA CGGCCTGGCC GGGTCTGGCC
GCGGTCGCCG ACGCCGCCCT TGTGATCTCC ACGGTGCCGG CGGGGGCCGC CGACCGCGTT
GCCCGGGAGG CGCCGCTGCG CGCCGGCCAG GTGGTCTTCG ACGTCATTTA CCACCCGTGG
CCGACGCCGC TCGCCGCAGC GGCACGGTCC GCCGGTTGCA CGGTCATCGG CGGTCTGGAG
CTTCTGGTCC GCCAGGCGGC GGCTCAGGTC GAGCAGTGGA CCGGCCGACC CGCACCGATC
GACGCGATGC GGGCAGCGGT CCGCGATCGG CTGGACTGA
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| Protein sequence | MTRRTGIGDD PAGTSRAADG VTRLGDPSPA ADGAGPAVLR RRAAVLGSPI DHSLSPVLHR
AAYRALGLDW SYDAIECDET RLGTLLDELG PEFVGLSLTM PLKRAVLPLL DDVSPLARDV
GAVNTVTFLD EPARRRRVGD NTDVTGMVAA LRGVNPRPAA GRVVVLGAGG TAAAALAAVR
EFGWAEVGVV VRDQGRAAAL RTAADRLGVQ LTFTAWPGLA AVADAALVIS TVPAGAADRV
AREAPLRAGQ VVFDVIYHPW PTPLAAAARS AGCTVIGGLE LLVRQAAAQV EQWTGRPAPI
DAMRAAVRDR LD
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