Gene Acel_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1318 
Symbol 
ID4486371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1467674 
End bp1468123 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID639730098 
Productsecretory protein 
Protein accessionYP_873076 
Protein GI117928525 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.011576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAC GAATCCGTGA GGCGATGGAG CGGCGGGACG AGGGTTTCAC CCTTATTGAG 
CTGCTCGTCG TCATGCTCAT CATCGGCATC CTTGCCGCGA TTGCCATCCC GCTCTTCCTC
AACCAGCAGA ACAAGGGGTA TGAGGCGAGC GAGAAAGCCG ACCTGCACAA CGTGTTGACC
AACATCCAGT CGGAGATGGT GGACGGGCCG ACAACGGTGA CGGTCACCCA AACCGGAAGC
AGCTACACGG TAACGACCGA CATTGACACC ACGGGTGTGA CGGGCACGCT GACCGCGGGG
AACACGCTCG TTGTCAAGCC CAGCCCGATT ACGGTCGGCC AGCCGTACTG CCTGGAAATG
GACAACAGCC ACGCCGGTGC CAGCCCGTGG CACATCAGCG TCAATCCCAC AACCAACAGC
CAGCAGCTGG CCAAGGGTGC ATGCCCGTGA
 
Protein sequence
MLARIREAME RRDEGFTLIE LLVVMLIIGI LAAIAIPLFL NQQNKGYEAS EKADLHNVLT 
NIQSEMVDGP TTVTVTQTGS SYTVTTDIDT TGVTGTLTAG NTLVVKPSPI TVGQPYCLEM
DNSHAGASPW HISVNPTTNS QQLAKGACP