| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1283 |
|---|
| Symbol | |
|---|
| ID | 4485624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1430236 |
|---|
| End bp | 1431498 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639730063 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_873041 |
|---|
| Protein GI | 117928490 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00667141 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.645291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC AGCGGACAGA TCCGTGGGTT TCCATCGGCG GTCGCAGCGT CGCTCGACGG
GATTTCCTCA GGCTGCTCGG CATCGGATCA GGCGCGGCAC TGCTCAGCGC CTGCGGCGTC
AAGGGCGCGG CGAAGCCGGC GGCCAGCGGC AGTGCGCTCG CGACGGAGAT TCAAGATTAT
TGGAAGGGGA AGAAGAAAAC CGGTCTGGTC AACTGGGCGC AGTGGCCGCT GTACATCGAC
GTCAATTCCC AGAACAAGAA CGACCACCCG TCGGTCGACG CCTTCACCAA GGCGACCGGG
ATAAAAGTCA ATTACTACGA GGTGATCCAG GACGATCCCT CATTCCTCGC GAAAATCCTT
CCGGTGCTGC AGGCGGGCCA GTACACCGGG TACGATGTCG CGACCATCAC CAACGGCACG
TCGCTCGACC GGCTCATGCA GCTCGGTTAC TTGATTCCAC TTGACCACTC CTACCTGCAG
AACTTCGCGA AGTACGTCGA TCCGAAGTAC CGGAAGACCT CGTACGATCC GGGAAACGTC
TATACCGTGC CGTGGCAGTC AGGGTTCACC GGCATCGCCT ACGACACCAC CAAGGTGCCG
AAGCCGATCA CCAGTTTCTT CGACCTCTGG GACGAGCGGC TCAAGGGCAA GGTGGGCATG
TTCGCGGACA ACGAGGATCT GCCGAACGCG GTCCTCGTGG CGATGTTCGG TGACCCGCAG
AAAACCGGTC CCAATGAGTG GCGTCAAGCC GCGGCCAAAC TCAAGGAGCA GCGTGACAAG
GGAATCGTCC GCCAGTACTA CGAGCAGGAT TACATCAAGG CGTTGAGCAA CGGTGACATC
TGGGCGAGCC AGGCCTGGTC CGGTGATGTG TTTCAGGCGC TTGCCTCCGG CGCCAGCAAC
CTGAAATTCG TGATACCCAA GGAGGGCGGC GTCATCTGGA CCGACAACCT GGTGCTCCTC
AAGTACGCCC AGCATCCGGT TGACGCGCTC ATGCTCATGG ATTGGTACTA CCAGCCGAAA
ATCGCCGCCA TGGTGGCCGA GTACGTCAAC TACATCACGC CCGTGCCTGC GGCCCGTGAC
GTCATCCTCG CTGATGCCAA GCAGGCCACC GGCGACGACC AGAAGTCCCT GCTTGACGTG
GCGAACAGCC CGCTGGTCTT CCCAACGGAG CAGGACTACC AGAAGGTGTA CAACTACCGG
ACCCTGACCG AAGACGAACT CACCGTCTGG AACAGCATTT TCGAGCCCAT CTACCAGGGG
TAG
|
|---|
| Protein sequence | MTEQRTDPWV SIGGRSVARR DFLRLLGIGS GAALLSACGV KGAAKPAASG SALATEIQDY
WKGKKKTGLV NWAQWPLYID VNSQNKNDHP SVDAFTKATG IKVNYYEVIQ DDPSFLAKIL
PVLQAGQYTG YDVATITNGT SLDRLMQLGY LIPLDHSYLQ NFAKYVDPKY RKTSYDPGNV
YTVPWQSGFT GIAYDTTKVP KPITSFFDLW DERLKGKVGM FADNEDLPNA VLVAMFGDPQ
KTGPNEWRQA AAKLKEQRDK GIVRQYYEQD YIKALSNGDI WASQAWSGDV FQALASGASN
LKFVIPKEGG VIWTDNLVLL KYAQHPVDAL MLMDWYYQPK IAAMVAEYVN YITPVPAARD
VILADAKQAT GDDQKSLLDV ANSPLVFPTE QDYQKVYNYR TLTEDELTVW NSIFEPIYQG
|
|---|
| |