Gene Acel_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1242 
Symbol 
ID4486690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1381911 
End bp1382561 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID639730019 
ProductNUDIX hydrolase 
Protein accessionYP_873000 
Protein GI117928449 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.141201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.571829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAGG ACGGTCCGGC GAGCGAGCCG GTGCGTGACG AACCAGCGCC GCGACCGGTG 
TGCGCGACGC ACCGGCACTT CACCGGCAGG GTGGTGAGCC TCCGGACCGA CGTGGTGGAC
CTTGGCCCGG CAGGCCGGGT GGACCGGGAT GTCGTCGAGC ATCCCGGTGC GGTCGGTGTC
ATCGCCGTCG ACGCCGAACT CCGCGTGCTC CTCGTTCGCC AGTACCGGCA CCCGGTGGGC
TGTCTGCTGT GGGAGCCGCC GGCGGGACTC CTCGACATCC CGGGAGAGGA TCCACTGACC
GCAGCGCGGC GGGAGCTCGC CGAGGAAGCT GGCTATCAAG CCGCGGAATG GGCGGTGCTC
GTCGACGCGT TCACCTCACC CGGCGGGTCG ACGGAGGCGG TGCGCATTTA CCTCGCACGC
GAACTCCAGG CGCTTCCGCC GGAAGACCGG CACGTGGGTG TTGCCGAGGA GTACGACATG
CCCACCCGCT GGGTGCCCCT CGCCGATGCG CGACGCGCGG TCTTGAGCGG GGAACTCCAT
AATCCCCTTG CCGTCATGGG AATTCTCGCC GCCTGCGCCC TGCTCCTCGA CGGCGTGGCG
GGCGGGCCTC GACCGGCTGC CGCCCCGTGG CTGCGGGCCG TGACACAGTA A
 
Protein sequence
MREDGPASEP VRDEPAPRPV CATHRHFTGR VVSLRTDVVD LGPAGRVDRD VVEHPGAVGV 
IAVDAELRVL LVRQYRHPVG CLLWEPPAGL LDIPGEDPLT AARRELAEEA GYQAAEWAVL
VDAFTSPGGS TEAVRIYLAR ELQALPPEDR HVGVAEEYDM PTRWVPLADA RRAVLSGELH
NPLAVMGILA ACALLLDGVA GGPRPAAAPW LRAVTQ