Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1238 |
Symbol | |
ID | 4486686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1377798 |
End bp | 1378625 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639730015 |
Product | condensin subunit ScpA |
Protein accession | YP_872996 |
Protein GI | 117928445 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.795284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCC GGACGTCGAC GCCGCCCCAC GACGCAGCCG TGACCGACCG TCCGCCCGTC GAGAATCCAT CGGGCGACGA TTTCGTCGTC CACCTCGGTG TTTTTGACGG GCCCTTCGAA CTCCTCCTCG CGCTCATCGC CAAGCACGAG CTGGACATCA CCGCTATTTC GTTATCGAAA GTCACCGATG ACTTCATTGC ATACATCCGG GAAATGGGTC CCACCTGGGA TCTCGACAAG GCGACAAGTT TTCTCGTCGT CGCCGCCACG CTCGTCGATT TGAAGGCGGC CCGGTTGCTG CCGTCGGCGC CGGTCGAGGA CGAAGAGGAC GTCGCGCTTC TCGAAGCGCG TGACCTTTTG TTTGCCCGCC TGCTGCAGTA TCGGGCGTAT AAGCAAGTCG CCGGCATCCT CGGGGCGATG TGTGATGAGC AGGCTCGGCG GTATCCCCGC ACGGCGGGTC CGGATCCGGA GTTTCACGGC CTTCTCCCCG AGGTGTTCCT CGGCTTGGGT CCGGCCGGAT TCGCCGCCCT CGCCGCCCGT GTGCTGGCGC CGAAACCGCC GCCCACGGTC CAGATCGAGC ACCTGCACGC CCCCATCGTT GACGTGCGGG AGCAGGCGGC GGTTCTGCGC CGCCGGTTGG CGCGGTTGCG CGCGGCGTCA TTCCGTACCC TGGTCGCCGA TTGTGCGACC ACCGCTGAAA TCGTCGGGCG CTTTCTTGCG CTGCTCGATC TCTTCCGGGA AGGTGTCGTC GTATTCGAGC AGGTGGATCC GCTGGGGGAT CTCATCGTGC GGTGGGAAGT CCCCGCCGAC CAAGGCAAGG AGTACTGA
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Protein sequence | MTRRTSTPPH DAAVTDRPPV ENPSGDDFVV HLGVFDGPFE LLLALIAKHE LDITAISLSK VTDDFIAYIR EMGPTWDLDK ATSFLVVAAT LVDLKAARLL PSAPVEDEED VALLEARDLL FARLLQYRAY KQVAGILGAM CDEQARRYPR TAGPDPEFHG LLPEVFLGLG PAGFAALAAR VLAPKPPPTV QIEHLHAPIV DVREQAAVLR RRLARLRAAS FRTLVADCAT TAEIVGRFLA LLDLFREGVV VFEQVDPLGD LIVRWEVPAD QGKEY
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