Gene Acel_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1238 
Symbol 
ID4486686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1377798 
End bp1378625 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID639730015 
Productcondensin subunit ScpA 
Protein accessionYP_872996 
Protein GI117928445 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.795284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC GGACGTCGAC GCCGCCCCAC GACGCAGCCG TGACCGACCG TCCGCCCGTC 
GAGAATCCAT CGGGCGACGA TTTCGTCGTC CACCTCGGTG TTTTTGACGG GCCCTTCGAA
CTCCTCCTCG CGCTCATCGC CAAGCACGAG CTGGACATCA CCGCTATTTC GTTATCGAAA
GTCACCGATG ACTTCATTGC ATACATCCGG GAAATGGGTC CCACCTGGGA TCTCGACAAG
GCGACAAGTT TTCTCGTCGT CGCCGCCACG CTCGTCGATT TGAAGGCGGC CCGGTTGCTG
CCGTCGGCGC CGGTCGAGGA CGAAGAGGAC GTCGCGCTTC TCGAAGCGCG TGACCTTTTG
TTTGCCCGCC TGCTGCAGTA TCGGGCGTAT AAGCAAGTCG CCGGCATCCT CGGGGCGATG
TGTGATGAGC AGGCTCGGCG GTATCCCCGC ACGGCGGGTC CGGATCCGGA GTTTCACGGC
CTTCTCCCCG AGGTGTTCCT CGGCTTGGGT CCGGCCGGAT TCGCCGCCCT CGCCGCCCGT
GTGCTGGCGC CGAAACCGCC GCCCACGGTC CAGATCGAGC ACCTGCACGC CCCCATCGTT
GACGTGCGGG AGCAGGCGGC GGTTCTGCGC CGCCGGTTGG CGCGGTTGCG CGCGGCGTCA
TTCCGTACCC TGGTCGCCGA TTGTGCGACC ACCGCTGAAA TCGTCGGGCG CTTTCTTGCG
CTGCTCGATC TCTTCCGGGA AGGTGTCGTC GTATTCGAGC AGGTGGATCC GCTGGGGGAT
CTCATCGTGC GGTGGGAAGT CCCCGCCGAC CAAGGCAAGG AGTACTGA
 
Protein sequence
MTRRTSTPPH DAAVTDRPPV ENPSGDDFVV HLGVFDGPFE LLLALIAKHE LDITAISLSK 
VTDDFIAYIR EMGPTWDLDK ATSFLVVAAT LVDLKAARLL PSAPVEDEED VALLEARDLL
FARLLQYRAY KQVAGILGAM CDEQARRYPR TAGPDPEFHG LLPEVFLGLG PAGFAALAAR
VLAPKPPPTV QIEHLHAPIV DVREQAAVLR RRLARLRAAS FRTLVADCAT TAEIVGRFLA
LLDLFREGVV VFEQVDPLGD LIVRWEVPAD QGKEY