| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1235 |
|---|
| Symbol | |
|---|
| ID | 4486683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1375159 |
|---|
| End bp | 1376274 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639730012 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_872993 |
|---|
| Protein GI | 117928442 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.934914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGACA GCAACGGCAA CCCGAGCGAG CTGACACTGC GCCGGGTGCT CGTCATCGGC
ACCGGGTTGA TGGGCACCTC GCTCGCGCTG GCGCTCCGGG AAGCGGGCAT CGAGACGCGG
CTGCACGACA TTGCGGTCGG CCGGCTGGCC CTCGCGGTCG AACGCGGGGC AGGTGTGCCG
CACGACGAGG ACCTCGACGG CGGTTATGAC ATCGCCGTCC TCGCCATCCC CCCCGATGCG
GTCGCGGGAG AGCTCCTCCG CTACCAGCGC CTTGGCGTCG CTCGGAGTTT CACGGACGTC
GCGTCGGTGA AGAGCAAACC GCTGGCCGAA GCCGAGAAGA TCGGCGCCGA TATGACGACA
TTCGTCGGTG GCCACCCGAT CGCCGGTCGG GAACGATCCG GACCGGCCGC CGCGCACCCC
GATCTCTTTG TCGGCCGTCC GTGGGTCATC ACGCCGACCC CGGCGGCCGG CGAGGAAGCG
ATTGCCGCCG TGCGTGCACT CGCCGTTGCC GCTGGCGCCA CTCCCGTGGT CATGACCGCC
GAGGAGCATG ACGCCGCACT GGCTCTCGTC TCGCACCTCC CGCACCTGTT GGCCTCCGTA
CTGGCCGCCC AGCTCGTCGA CGCCCCACGC GATTTCACTG CGCTCGCCGG CACCGGCCTG
CAGGACGTTA CCCGGATCGC CGCGGGCGAC CCGCAACTCT GGACGGAGAT CCTGGCGGCA
AATGCCGATC ATCTGCTCGG CTATTTGGAG CGGTTCCAGC AGCGGCTTCA GGACGCGGCC
GCGTACGTGG CGCGAATTGC GCGTGGGGAC GCCGCGGCGA CGACCGCCCT CACCGAGTTG
CTCCGCACCG GCGTGCAGGG CCGGTTGCGG GTGCCGGTGA AGCGCGGCGA ACCGGCCGCC
GGCTTCGCCA CTGTTGCGGT GACGATTCGC GACGCGCCGG GCGAGCTGGC TGCGCTGCTC
CGCGCGCTCG CTGAAGCCGG GATCAACGTC GAAGACGTGC GGGTGGAGCA CGAGCCGGGC
CGGCCCGTCG GCGTCGTCGA GCTCGACGTC CGGGAGGACA AGGCACAAGC TTTGATCCGG
TGTGTCCGCG ACGCTGGATG GCAGCTGTAC GTGTAG
|
|---|
| Protein sequence | MADSNGNPSE LTLRRVLVIG TGLMGTSLAL ALREAGIETR LHDIAVGRLA LAVERGAGVP
HDEDLDGGYD IAVLAIPPDA VAGELLRYQR LGVARSFTDV ASVKSKPLAE AEKIGADMTT
FVGGHPIAGR ERSGPAAAHP DLFVGRPWVI TPTPAAGEEA IAAVRALAVA AGATPVVMTA
EEHDAALALV SHLPHLLASV LAAQLVDAPR DFTALAGTGL QDVTRIAAGD PQLWTEILAA
NADHLLGYLE RFQQRLQDAA AYVARIARGD AAATTALTEL LRTGVQGRLR VPVKRGEPAA
GFATVAVTIR DAPGELAALL RALAEAGINV EDVRVEHEPG RPVGVVELDV REDKAQALIR
CVRDAGWQLY V
|
|---|
| |