Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1192 |
Symbol | |
ID | 4485514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1324979 |
End bp | 1327993 |
Gene Length | 3015 bp |
Protein Length | 1004 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639729968 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_872950 |
Protein GI | 117928399 |
COG category | [E] Amino acid transport and metabolism [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase [TIGR03208] cyclohexanecarboxylate-CoA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0238022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTCA TCGTCAAGGA GACGGTCGGC GAGCTTACCG GCGAGCTGGC TATCCCAAAC TCCAAGTACC ACGCCCACCG CGCCCTCATC CTCGCCTCGC TGGCAGACGG GACCAGCTAC ATCCACGGCC TGTCGGACGC CGGGCATGTC CGGTACACCA TCGGCGCACT CCGCGCCCTC GGCACCCGCA TCGACGTCGA CGGCAACACC TTCGTCGTCC GCGGCGGACC CTACCGGCCG CGCCGTGCCG ACGTGTCGGT CGGCAGCTCG GGCACAACCC TGTACTTCCT CACCGGGCTC GCCGGGCTCG CCGACGCGCC GGTGCGGATC GTCGGCCAAC GCTACTTTCA GCGCCGCCCG ATCCGGCCGC TGCTCGCCGC TCTGCAGGCC CTCGGCATGC AGGTGGGATC GGCCACCGGG TGCCCGCCCA TCGAGGTGCG ACCGGGCCGT CCGCGCGGCG GCCGGGTGAC GATCGCCGGA ACGTTGTCGC AGTGGATTTC GGGGCTGCTC CTTCTGGCGC CGTTCGCCGC CGCCACCACC GTCATCGAGG TGGACGGCGA ACTCAACGAG CGCTCCTACA TCGATCTCAC CATCCGGATG ATGCGGGAGT TCGGCCTCCA CGTCGACGCC GCGCCCGATG GCCGGCGGTT TGAAGTCCCG CCCAACCAGA CTCCCCGCCC GGCGACCGTC ACGCTGCCGC CGGATGTCGG CGCCGCCGCA TTTGGGCTCG CAGTGACCGC ACTGCACCCC TCGGATGTCC TCTTTCGCGG GTTGCCGGCC CTCTCGGCGT CCGAGACTGA CCATCCCGAG GCGGATCTGC TCGACATCGT CGCCGGCATG GGCCTGCCGA TGCGGATCGA CCCTGACGCC GGCGTGGTCC GGGTCACCCA TCACGGGATC GACCTTGCCC CGATCGACGT CGACTGCCGC AGCGTGCCGG ACATGCTGCC GATCCTCTCG GTGCTCGCCA CCTTCGCCAA GGGGCGCAGC AGATTGCGGA ATATTGCCCA TGTCCGGCTG AAGGAATCCG ACCGCGTCGC GGCCATGCTT CAACTGAACC GCATGGGTGG ACGGTTGGAG CAGCGCGGAG ACGAGCTCGT GTGCGACGGT GTCGACCGGC TGGTCGGTGC GGACCTGTCG TCCTTCAATG ACCACCGGGT GCTGATGGCG CTTGCGGTGG CGGCGTCCCG CGCCGAGGGC GAGACCCGGC TGACCTACCC AAACGCGTAT CGCATTTCGT ATCCGCGCTT CCTGGATGAA ATGAACGGTA TTGGCGTGGC GATGTCGGTC GAAGCGGCGC CGGCCCGGAC GACGCGGCCC GCGCCGCGCC GCACCGCATC AACGGTGACA CCCGGACGAC TGGCCGCCGT ACCGATTGAC CAGCTTGTCG CGCGATGGGC TCGGCAGCGG CCGGACGAAC CCGCCGTCAT CGACATCGGA GTGACCGGTG ACGCGGATCG CACCATCACC TGGCGGGAAT TCGACGAGCA GGCAAGCGAC GTCGCGCTCG CCTTGCTGCG GTCTGGAGTG GAGCCGGCGG AGCCGGTGGC GTACCAATTG CCGAATTGCG CGGAATTCCC GACGCTGGCA TTGGCGGTCG CCCGGATCGG GGCGGTGAGC TGCCCGTTGA TGCCGTTCTA CCGCCGGCGG GAAGTCGCGT TCATGCTCAC ACGCTCCCGC GCCCGTGTTC TTGTCGTGCC CCGATATTTC CGCAACCGCG ATTATGTCGC GGAAACCCAT GCCCTTCTCA CCGAAGAACC GGATGTGTCG GTGCGCCGCG TCATCGTGCT GGGACCGGGT CCGGTTCCGG ACGGGCCGGC GGGCGTGCAG TGGCAGACCT TCGACGACTG GGTCGCCGCC GCGCGAACGG ACCGTACGGA GCGGGACCGC ATTCTCGCGA CGCGCCGTCC GGCGCCGGAC GCGCGGGCCC AGCTTCTCTT CACCTCGGGG ACGTCCGGGG AACCCAAGGG CGTGCTGCAC CGCATGAACA CCCTCACCCG CGCGGTCGGC ATGGAAATCC GCCACTTGGG ACTCACCAAC GCCGACCGCA TTTTCGTCCC GTCACCCCTT GCCCACCAAA CCGGGTTTCT CTACGGCATG TGGCTCGCCT TCGGGCTCGG CGTACCGCAG ATTCTGCAGC CGGTGTGGGA CGGGCGGATC GCTGCAGCGG CCATCCGCCG CCGCCGCGCG ACATTCGTGC AGGCCGCGAC GCCGTTCCTC GCGGATTTGG TGAGCGCGGT GGAGGAAAGC GGCGAGCCGC TGGAGAGTCT GCGGATTTTC GTCGCCACCG GTGCCGCGGT GCCGCGGAAT CTCGCGGAAC GGGCCACCCG GCTCCTCGGC GCGGCGGTCT GCGGGGCCTG GGGCACAACG GAAACGTGCT TGGGCACGCT CGCTGCGCCC ACGGATGAGC CCGCCAAAGT CTGGGGCACC GACGGCCGGC CGCTTGCCGA CATCGCCGTC CGCGTCGTCG ATGACCACGG CGAGGAGCTC GCCCGCGGGG TGGAAGGACA TTTCGAGGTG AAGACCCCGT GCCTCTTCGA GGGGTACCTG GACCACCCGG AGTGGACGGC GCAGGCGCTC ACCCCAGACG GCTGGTATCG CAGCGGCGAC CTCGCGGTCA TCGATGAATC TGGATATGTC CGCATCACCG GGCGGGCCAA GGATGTCATC AACCGCGGCG GCGAGAAGAT ACCGGTCGCC GAGGTGGAGC AGATTCTGCA CACCCACCCG GCGATTCGGG ACGTCGCGAT CGTCGCCATG CCCGACGAGC GGCTGGGCGA ACGTGCCTGC GCGTTCGTGG TGCTGCGGCC GGCGGCAACA CTGACGTTTC CGCAGGTGCA GCAGTACCTC GACGAACGTC ATGTCGCCAA GCAATACTGG CCGGAGCGGC TGGAGATCAT CGATGAACTG CCACGCAACC CGAGCGGTAA AATCCAGAAG TTCAAACTCC GCGAGCGGAT CGCGGACATT TTGCGCAGCG AGAGCAACCC TGGATCCCTG CGACACGGAA AGTGA
|
Protein sequence | MRLIVKETVG ELTGELAIPN SKYHAHRALI LASLADGTSY IHGLSDAGHV RYTIGALRAL GTRIDVDGNT FVVRGGPYRP RRADVSVGSS GTTLYFLTGL AGLADAPVRI VGQRYFQRRP IRPLLAALQA LGMQVGSATG CPPIEVRPGR PRGGRVTIAG TLSQWISGLL LLAPFAAATT VIEVDGELNE RSYIDLTIRM MREFGLHVDA APDGRRFEVP PNQTPRPATV TLPPDVGAAA FGLAVTALHP SDVLFRGLPA LSASETDHPE ADLLDIVAGM GLPMRIDPDA GVVRVTHHGI DLAPIDVDCR SVPDMLPILS VLATFAKGRS RLRNIAHVRL KESDRVAAML QLNRMGGRLE QRGDELVCDG VDRLVGADLS SFNDHRVLMA LAVAASRAEG ETRLTYPNAY RISYPRFLDE MNGIGVAMSV EAAPARTTRP APRRTASTVT PGRLAAVPID QLVARWARQR PDEPAVIDIG VTGDADRTIT WREFDEQASD VALALLRSGV EPAEPVAYQL PNCAEFPTLA LAVARIGAVS CPLMPFYRRR EVAFMLTRSR ARVLVVPRYF RNRDYVAETH ALLTEEPDVS VRRVIVLGPG PVPDGPAGVQ WQTFDDWVAA ARTDRTERDR ILATRRPAPD ARAQLLFTSG TSGEPKGVLH RMNTLTRAVG MEIRHLGLTN ADRIFVPSPL AHQTGFLYGM WLAFGLGVPQ ILQPVWDGRI AAAAIRRRRA TFVQAATPFL ADLVSAVEES GEPLESLRIF VATGAAVPRN LAERATRLLG AAVCGAWGTT ETCLGTLAAP TDEPAKVWGT DGRPLADIAV RVVDDHGEEL ARGVEGHFEV KTPCLFEGYL DHPEWTAQAL TPDGWYRSGD LAVIDESGYV RITGRAKDVI NRGGEKIPVA EVEQILHTHP AIRDVAIVAM PDERLGERAC AFVVLRPAAT LTFPQVQQYL DERHVAKQYW PERLEIIDEL PRNPSGKIQK FKLRERIADI LRSESNPGSL RHGK
|
| |