Gene Acel_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1020 
Symbol 
ID4484561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1126777 
End bp1127319 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID639729795 
Producthydrogenase maturation protease 
Protein accessionYP_872779 
Protein GI117928228 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00482421 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCGAC GGCGCGTCGT GGTGGCCGGC TGCGGTAACC CATTTCGAGG CGACGACCAG 
GTGGGCCTTG CCGTGGCGGA GCGGCTCGCG GGCCGCCGGG AGCCGGGTCT GCGGGTGGTC
TCTGCGGCTG GGGACGTGAC CGGCGTTCTG GACGCCTTCC TCTCCGCGGT CGTCGACGAG
GCCATCCTGG TGGACGCCGT GCATGCACCG TTGCCGGCGG GCACAGTGAT CCGCTCCGAT
GCCGACGCGG CGACTGACTT TGGACGGCAC GCCGGGTCGT CGACGCATGC GTTCGGCGTC
CCGGAGCTCC TCGACATTGC TGGCGTTCTC GGCTGTCTGC CCCGACGTGT TGTCATCTAC
GGCGTCGTCG GTTCTGCCTT CGCGCTCGGG CAGCCGATGA GCCCGGCGGT GGCTGCCCAG
GTCGACCACG TGGCGGCCTT GGTTTCCCGC GAAGCGACGT GGGCACTGCG GTCCGACAGT
GCCGCAGCTG CGGCTGGGGG CGCCGGGTGG GAAGGGGTGG TCGGATGCAC GAGCGGGCAC
TGA
 
Protein sequence
MSRRRVVVAG CGNPFRGDDQ VGLAVAERLA GRREPGLRVV SAAGDVTGVL DAFLSAVVDE 
AILVDAVHAP LPAGTVIRSD ADAATDFGRH AGSSTHAFGV PELLDIAGVL GCLPRRVVIY
GVVGSAFALG QPMSPAVAAQ VDHVAALVSR EATWALRSDS AAAAAGGAGW EGVVGCTSGH