Gene Acel_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1016 
Symbol 
ID4485020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1123372 
End bp1123842 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID639729791 
Productcyclic nucleotide-binding protein 
Protein accessionYP_872775 
Protein GI117928224 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00458369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCGCG AACTTGACAC TGTCCTCGCC GAGGTTCCGC TCTTCGCGGA TCTGCCGGCC 
ACCGCACGTC AGCTGCTCAC CGGATGCGCG GCGAATGTCC GCTTCGCCGA AGGGGCGCAG
CTCTTCCGTA CCGGGGAGCC GGCGGACAGT TTCTACGTGA TCCGTCATGG CACGGTCGCT
CTCGAAATGT TCCTTCCCAG TCGGGGCGCC ATGACGATCG AAACTCTTGG CGCCGGCGAG
GTTCTCGGCT GGTCGTGGAT GTTTCGTCCG TACCGATGGC ATTTCGACGC GCGCGCTCTC
ACCACCGTGC TCGCGCTGGG TTTCGATGCA GCATGCCTGC GCGAGAAATG CGCAGCAGAC
CCGAGCCTCG GTTACGCGCT CATGGAGCGG TTCGCTCAGG TACTGATTGA GCGGTTGCAG
TGGACGCGAC TGCGGTTGAT GGATGTGTAC GGCGATGTTG ACCTTCGATG A
 
Protein sequence
MIRELDTVLA EVPLFADLPA TARQLLTGCA ANVRFAEGAQ LFRTGEPADS FYVIRHGTVA 
LEMFLPSRGA MTIETLGAGE VLGWSWMFRP YRWHFDARAL TTVLALGFDA ACLREKCAAD
PSLGYALMER FAQVLIERLQ WTRLRLMDVY GDVDLR