| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0950 |
|---|
| Symbol | |
|---|
| ID | 4485745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1047362 |
|---|
| End bp | 1048153 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639729725 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_872709 |
|---|
| Protein GI | 117928158 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.013662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.313997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGT TGATGAAGCG TATGTCGCTC ATCTTTCGGG CCAAAGCGAA TAAGGTCTTG
GACCGCGCGG AGGATCCCCG GGAAACGCTT GACTACAGCT ACACCAAGCA GTTGGAGCTG
CTGCAGAAAG TACGGCGCGG CGTCGCTGAT GTCACCACCT CGCGGAAACG CCTCGAATTG
CAAGCACAGC AGCTGCAGCA GCAGGTCGAG AAACTGGACA ACCAGGCGCG GGCCGCTCTT
GCGCAGGGTC GGGAAGACCT CGCGCGGGAG GCGCTGACCC GCAAGTCCGC GCTGCAGAAC
CAGATTGCGG ATCTGCAGGC GCAGCACGCC AATCTGCAGG CGGAGGAAGA AAAACTCACC
CTTGCCGCGC AACGACTCCA AGCGAAGGTC GATGCCTTCC GGCTGAAGAA GGAAACGATC
AAGGCGACGT ACACGGCGGC CGAGGCACAG ACGCGGATCG GGGAGGCCTT CTCCGGAATT
TCCGAGGAAA TGGGCGACGT CGGTCTGGCG ATTCAGCGTG CGGAAGACAA GACGCAGGCG
ATGCAGGCTC GGGCCAGTGC GATCGACGAG CTGCTCGCTT CCGGCGCCCT GGAGGACGTG
ACGGGTACGA CCAAGGACGA CATCCAAGCC GAGCTGGACC GGATGGCTTC CACCAACCAG
GTGGAGTTGG AACTCGCCCG TATGAAGAAC GAACTCTCCG CCGGGAAGCC GACGCCGGCG
CTGGGTGCGG GCAGCGGGGG CGAGGCCGGA TCGGCGTCCC CGGCTGCAAG TGAAACCGAG
GGGTCGGTGT GA
|
|---|
| Protein sequence | MAGLMKRMSL IFRAKANKVL DRAEDPRETL DYSYTKQLEL LQKVRRGVAD VTTSRKRLEL
QAQQLQQQVE KLDNQARAAL AQGREDLARE ALTRKSALQN QIADLQAQHA NLQAEEEKLT
LAAQRLQAKV DAFRLKKETI KATYTAAEAQ TRIGEAFSGI SEEMGDVGLA IQRAEDKTQA
MQARASAIDE LLASGALEDV TGTTKDDIQA ELDRMASTNQ VELELARMKN ELSAGKPTPA
LGAGSGGEAG SASPAASETE GSV
|
|---|
| |