Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0887 |
Symbol | |
ID | 4485719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 978241 |
End bp | 979071 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639729662 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_872646 |
Protein GI | 117928095 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.429644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCG GTGTGGAAAC GTTGCGCAGT ACTCCGGTAC GCGGAGACGA CGAATGGGCG GCCGCGGGTG CCGGACCGTG GTGGTGTCGT CCCGCTGTGC TTCGTATTGC TGCGGGCGTG CTCATTCTTG CGGTCTGGCA GTTTGTCGTC GGATCGTGGG CTCCCCATTA CGTGGCCCGA CCGATCGGGG TCGTGCGCGA CCTGCCGAAG GTCTTGACCG ACAACGTCTT TTATCACGAC CTCGGCAGTA CGCTCTTCGC GGTCATCGTC GGCCTTCTCA TTGCTCTCGT TGGCGGTAGT CTTCTCGGCC TTGTGGTGGG TCGACTGAGC GACGTGCAAC GCGTTCTCGG CATGTACGTC AGCGGCCTCT ATGCGATGCC CATCATCGCG CTGGTCCCGC TCATCACGGT CTGGTTCGGC TACAGCGCGA CCACGCGCCT CGTCGTCATC GTCATCGAAG CAGGATTGCC GATCGTCTAC AGCGTCGCGG AGGGAGCGCG GGCCGTCCCG GTGATGCACA TCGAGGTGAG CCGGCTCTAC CGTGCGCCCT GGTGGCGGGT CTGGGGCGGA GTCGTCCTTC CGGCGGCGGT ACCGTACGTG CTTGCCGGCG TCGATCTGGC CATCGGCCGA GCGCTTATCG GCGCTGTCGC CGCTGAGTTC ATTGCAGCCG TCCATGGACT GGGCTATTAC GTGCTCTCTC ACGTCAATTC CTTCAAAGAG GATCAGGCAT TCGTTGCTGT CTTAGCCTTG GCGCTCCTTG CCGTGCTCCT CCGGGCGGCG GTCAATGGGG CGACTCGGCG ATGGCTCCGG TGGTACCGGC AGAGTGGCTG A
|
Protein sequence | MSSGVETLRS TPVRGDDEWA AAGAGPWWCR PAVLRIAAGV LILAVWQFVV GSWAPHYVAR PIGVVRDLPK VLTDNVFYHD LGSTLFAVIV GLLIALVGGS LLGLVVGRLS DVQRVLGMYV SGLYAMPIIA LVPLITVWFG YSATTRLVVI VIEAGLPIVY SVAEGARAVP VMHIEVSRLY RAPWWRVWGG VVLPAAVPYV LAGVDLAIGR ALIGAVAAEF IAAVHGLGYY VLSHVNSFKE DQAFVAVLAL ALLAVLLRAA VNGATRRWLR WYRQSG
|
| |