Gene Acel_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0887 
Symbol 
ID4485719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp978241 
End bp979071 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID639729662 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_872646 
Protein GI117928095 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.429644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG GTGTGGAAAC GTTGCGCAGT ACTCCGGTAC GCGGAGACGA CGAATGGGCG 
GCCGCGGGTG CCGGACCGTG GTGGTGTCGT CCCGCTGTGC TTCGTATTGC TGCGGGCGTG
CTCATTCTTG CGGTCTGGCA GTTTGTCGTC GGATCGTGGG CTCCCCATTA CGTGGCCCGA
CCGATCGGGG TCGTGCGCGA CCTGCCGAAG GTCTTGACCG ACAACGTCTT TTATCACGAC
CTCGGCAGTA CGCTCTTCGC GGTCATCGTC GGCCTTCTCA TTGCTCTCGT TGGCGGTAGT
CTTCTCGGCC TTGTGGTGGG TCGACTGAGC GACGTGCAAC GCGTTCTCGG CATGTACGTC
AGCGGCCTCT ATGCGATGCC CATCATCGCG CTGGTCCCGC TCATCACGGT CTGGTTCGGC
TACAGCGCGA CCACGCGCCT CGTCGTCATC GTCATCGAAG CAGGATTGCC GATCGTCTAC
AGCGTCGCGG AGGGAGCGCG GGCCGTCCCG GTGATGCACA TCGAGGTGAG CCGGCTCTAC
CGTGCGCCCT GGTGGCGGGT CTGGGGCGGA GTCGTCCTTC CGGCGGCGGT ACCGTACGTG
CTTGCCGGCG TCGATCTGGC CATCGGCCGA GCGCTTATCG GCGCTGTCGC CGCTGAGTTC
ATTGCAGCCG TCCATGGACT GGGCTATTAC GTGCTCTCTC ACGTCAATTC CTTCAAAGAG
GATCAGGCAT TCGTTGCTGT CTTAGCCTTG GCGCTCCTTG CCGTGCTCCT CCGGGCGGCG
GTCAATGGGG CGACTCGGCG ATGGCTCCGG TGGTACCGGC AGAGTGGCTG A
 
Protein sequence
MSSGVETLRS TPVRGDDEWA AAGAGPWWCR PAVLRIAAGV LILAVWQFVV GSWAPHYVAR 
PIGVVRDLPK VLTDNVFYHD LGSTLFAVIV GLLIALVGGS LLGLVVGRLS DVQRVLGMYV
SGLYAMPIIA LVPLITVWFG YSATTRLVVI VIEAGLPIVY SVAEGARAVP VMHIEVSRLY
RAPWWRVWGG VVLPAAVPYV LAGVDLAIGR ALIGAVAAEF IAAVHGLGYY VLSHVNSFKE
DQAFVAVLAL ALLAVLLRAA VNGATRRWLR WYRQSG