Gene Acel_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0879 
Symbol 
ID4485710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp971500 
End bp972654 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID639729653 
Producthypothetical protein 
Protein accessionYP_872638 
Protein GI117928087 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0278062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTC GCCGCCGTGC GACGACGGCC CGCGCCCTCG AGCGGGCGGC CGGTGAGCTG 
GCCCGCGAAG CGGTCGCCCG CATGGAGGCG ACACTGCCGT GGTTCCAGGC GTTACCGGCA
GAGAGCCGGT CGTGGGTCGG GTTGATCGCG CAGGCCGGGA TTGCCGCGTT CGTCAACTGG
TTCAAGCATC CGGATCGGTC GAGGGAGATC ACCGCCGAAA TCTTCGGCAC CGCCCCGCGG
GACCTCGCCC GGACGGTGAG CCTCCGGCAG ACCGTGGAGA TGGTCCGCAT CACCGTCGAC
GTTGTCGAGG ACGCCGTCGA GCGGATCGTC GAGCCGCCGG ACGTCGGCCC GTTACGGGAA
GCGATCCTCA TCTACTCCCG CGAGGTCGCC TTCGCCGCGG CGCAGGTGTA CGCGCAGGCG
GCGGAGTCCC GCGGCGCCTG GGACGCCCGG CTTGAAGCCA TCATCGTCGA CGCCCTGGTG
CGCGGCGAGG CCGGCGACGT GCTCCGATCC CGGGCGGCGG CACTCGGGTG GCGCAACCCG
ACGTCCGTTG CAGTCGTGGT GGGCATGACC CCGGACGACG AGCCGGAGGT CGTCGTCGAC
GGCGTCCGGC GGGCGGCTCG GCACGCCGGT TGGGACGTGC TCGCCGGCGT CCAAGGGGAC
CGGCTCATCG CCGTCCTCGG CGGGGTGGCT GATCCGATGC ACGCGTCGCG GGCTCTGCTC
GCACAGTTCG GCCCGGGGCC GGTGGTGATC GGGCCAACGG CAACGGATCT GGTGTCCGCG
GGACCGGCGC TCCGCGAGGC ACTTGCCGGA TTGCGGGCCG CCCGGGCCCG CCCGTCGCTC
CCCCGCCCGG TTCACGCCCG AGACCTCCTG CCGGAGCGGG CACTCGACGG TGACGAGCTG
GCTCGCACAG CGCTCGTTGA GTCGATTTAC CAGCCGCTGG TGGCGGCCGG ACTCGTCGAC
ACTGTGGCGA CGTACCTTGA GCAGGCCGGC TCGCTCGAGG CGACGGCCCG GATGTTGTTC
ATCCACACCA ACACGGTGCG CTACCGGCTG CGTCGGGTGG CGGATCTGAC GGGATACAGC
CCGACGGATC CTCGCGACGC CTTCGCGCTC CACCTCGCCT TGGTGTACGG CCGGCTCACC
GAAGAGAAGC CGTGA
 
Protein sequence
MEPRRRATTA RALERAAGEL AREAVARMEA TLPWFQALPA ESRSWVGLIA QAGIAAFVNW 
FKHPDRSREI TAEIFGTAPR DLARTVSLRQ TVEMVRITVD VVEDAVERIV EPPDVGPLRE
AILIYSREVA FAAAQVYAQA AESRGAWDAR LEAIIVDALV RGEAGDVLRS RAAALGWRNP
TSVAVVVGMT PDDEPEVVVD GVRRAARHAG WDVLAGVQGD RLIAVLGGVA DPMHASRALL
AQFGPGPVVI GPTATDLVSA GPALREALAG LRAARARPSL PRPVHARDLL PERALDGDEL
ARTALVESIY QPLVAAGLVD TVATYLEQAG SLEATARMLF IHTNTVRYRL RRVADLTGYS
PTDPRDAFAL HLALVYGRLT EEKP