Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0615 |
Symbol | |
ID | 4486397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 655010 |
End bp | 658639 |
Gene Length | 3630 bp |
Protein Length | 1209 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639729382 |
Product | glycoside hydrolase family protein |
Protein accession | YP_872374 |
Protein GI | 117927823 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.435681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00420105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCGCCA TCTCAAAACG GCTGCGAGCC GGCGTCCTCG CCGGGGCGGT GAGCATCGCA GCCTCCATCG TGCCGCTGGC GATGCAGCAT CCTGCCATCG CCGCGACGCA CGTCGACAAT CCCTATGCGG GAGCGACCTT CTTCGTCAAC CCGTACTGGG CGCAAGAAGT ACAGAGCGAA GCGGCGAACC AGACCAATGC CACTCTCGCA GCGAAAATGC GCGTCGTTTC CACATATTCG ACGGCCGTCT GGATGGACCG CATCGCTGCG ATCAACGGCG TCAACGGCGG ACCCGGCTTG ACGACATATC TGGACGCCGC CCTCTCCCAG CAGCAGGGAA CCACCCCTGA AGTCATTGAG ATTGTCATCT ACGATCTGCC GGGACGCGAC TGCGCGGCGC TCGCCTCCAA CGGCGAACTG CCCGCTACGG CAGCAGGTTT GCAGACCTAT GAAACGCAGT ACATCGATCC GATTGCGAGT ATCCTGAGCA ATCCGAAGTA CTCCAGCCTG CGGATCGTGA CGATCATTGA GCCGGACTCG CTGCCAAACG CGGTCACCAA TATGAGCATT CAAGCGTGTG CAACGGCGGT GCCGTATTAC GAGCAAGGCA TCGAGTACGC GCTCACGAAA TTGCACGCCA TTCCGAACGT GTACATCTAC ATGGACGCCG CCCACTCCGG CTGGCTTGGG TGGCCCAATA ATGCCAGCGG ATACGTACAG GAAGTCCAGA AGGTCCTCAA CGCGAGCATC GGGGTCAACG GCATCGACGG CTTCGTCACC AACACGGCGA ATTACACGCC GTTGAAGGAG CCGTTCATGA CCGCCACCCA GCAGGTCGGC GGACAGCCGG TGGAGTCGGC GAATTTCTAC CAGTGGAATC CTGACATCGA CGAAGCCGAC TACGCGGCTG ACTTGTACTC GCGGTTCGTC GCCGCTGGCT TCCCAAGCAG CATCGGCATG CTCATCGACA CCTCACGCAA CGGTTGGGGT GGTCCGAACG AACCAACAGG CCCGAGCACC GCGACCGATG TCAACACCTT CGTCAACCAG TCGAAGATTG ACCTTCGGCA GCACCGCGGC CTGTGGTGCA ACCAGAACGG TGCGGGCCTC GGCCAGCCGC CGCAGGCAAG CCCGACGGAC TTCCCGAACG CGCACCTCGA CGCGTATGTC TGGATCAAGC CGCCGGGTGA GTCGGACGGC ACAAGCGCTG CGAGCGATCC GACAACTGGC AAGAAGTCGG ACCCCATGTG CGACCCGACG TACACGACGT CGTACGGGGT ACTGACCAAC GCGTTACCGA ACTCCCCGAT CGCCGGCCAG TGGTTCCCGG CGCAGTTTGA CCAGCTTGTC GCGAACGCAC GGCCAGCGGT GCCGACGTCG ACCAGCTCGA GCCCGCCGCC TCCGCCGCCG AGTCCGTCGG CTTCGCCGAG TCCGAGCCCG AGTCCGAGCC CGAGCAGCTC GCCATCGCCG TCGCCGTCTC CGAGCTCGAG CCCGTCTCCG TCGCCGAGCC CGAGTCCGAG CCCGAGTAGC TCGCCGTCGC CGTCTCCGAG CTCGAGCCCG TCTCCGTCGC CGAGCCCGAG TCCGAGCCCG AGTAGCTCGC CGTCGCCGTC TCCGAGCTCG AGCCCGTCTC CGTCGCCGAG CCCGAGTCCG AGCCCGAGTA GCTCGCCGTC GCCGTCTCCG ACGTCGTCGC CGGTGTCGGG TGGGCTGAAG GTGCAGTACA AGAACAATGA TTCGGCGCCG AGTGACAACC AGATCAAACC GGGTCTCCAG TTGGTGAATA CCGGGTCGTC GTCGGTGGAT TTGTCGACGG TGACGGTGCG GTACTGGTTC ACCCGGGATG GTGGGTCGTC GACACTGGTG TACAACTGTG ACTGGGCGGC GATGGGGTGT GGGAATATCC GCGCCTCGTT CGGCTCGGTG AACCCGGCGA CGCCGACGGC GGACACCTAC CTGCAGTTGT CGTTCACTGG TGGAACGTTG GCCGCTGGTG GGTCGACGGG TGAGATTCAA AACCGGGTGA ATAAGAGTGA CTGGTCGAAT TTCACCGAGA CCAATGACTA CTCGTATGGG ACGAACACCA CCTTCCAGGA CTGGACGAAG GTGACGGTGT ACGTCAACGG CGTGTTGGTG TGGGGGACTG AACCGTCCGG CACCAGCCCC AGCCCCACAC CATCCCCGAG CCCGAGCCCG AGCCCGAGCC CGGGTGGGGA TGTGACGCCG CCGAGTGTGC CGACCGGCTT GGTGGTGACG GGGGTGAGTG GGTCGTCGGT GTCGTTGGCG TGGAATGCGT CGACGGATAA CGTGGGGGTG GCGCATTACA ACGTGTACCG CAACGGGGTG TTGGTGGGCC AGCCGACGGT GACCTCGTTC ACCGACACGG GTTTGGCCGC GGGAACCGCG TACACCTACA CGGTGGCCGC GGTGGACGCT GCGGGTAACA CCTCCGCCCC ATCCACCCCC GTCACCGCCA CCACCACGAG TCCCAGCCCC AGCCCCACGC CGACGGGGAC CACGGTCACC GACTGCACGC CCGGTCCTAA CCAGAATGGT GTGACCAGCG TGCAGGGCGA CGAATACCGG GTGCAGACCA ATGAGTGGAA TTCGTCGGCC CAGCAGTGCC TCACCATCAA TACCGCGACC GGTGCCTGGA CGGTGAGCAC TGCGAACTTC AGCGGTGGGA CCGGCGGTGC GCCCGCGACG TATCCGTCGA TCTACAAGGG CTGCCACTGG GGCAACTGCA CCACGAAGAA CGTCGGGATG CCGATTCAGA TCAGTCAGAT TGGTTCGGCT GTGACGTCGT GGAGTACGAC GCAGGTGTCG TCGGGCGCGT ATGACGTGGC CTACGACATT TGGACGAACA GTACCCCAAC GACAACCGGT CAGCCAAACG GTACCGAAAT CATGATTTGG CTGAATTCGC GTGGTGGGGT GCAGCCGTTC GGGTCGCAGA CAGCGACGGG TGTGACGGTC GCTGGTCACA CGTGGAATGT CTGGCAGGGT CAGCAGACCT CGTGGAAGAT TATTTCCTAC GTCCTGACCC CCGGTGCGAC GTCGATCAGT AATCTGGATT TGAAGGCGAT TTTCGCGGAC GCCGCGGCAC GCGGGTCGCT CAACACCTCC GATTACCTGC TCGACGTTGA GGCCGGGTTT GAGATCTGGC AAGGTGGTCA GGGCCTGGGC AGCAACTCGT TCAGCGTCTC CGTGACGAGC GGCACGTCCA GCCCGACACC GAGCCCGAGC CCGACGCCGA CACCGAGCCC GACGCCGACA CCGTCTCCGA GCCCGACCCC GTCGCCGAGT CCGACCAGCT CGCCGTCGTC GTCGGGTGTG GCGTGCCGGG CGACGTATGT GGTGAATAGT GATTGGGGTT CTGGGTTTAC GGCGACGGTG ACGGTGACGA ATACCGGGAG CCGGGCGACG AACGGGTGGA CGGTGGCGTG GTCGTTTGGT GGGAATCAGA CGGTCACGAA CTACTGGAAC ACTGCGTTGA CCCAATCAGG TGCATCGGTG ACGGCGACGA ACCTGAGTTA CAACAACGTG ATCCAACCGG GTCAGTCGAC CACCTTCGGA TTCAACGGAA GTTACTCAGG AACAAACGCC GCGCCGACGC TCAGCTGCAC AGCCAGCTGA
|
Protein sequence | MPAISKRLRA GVLAGAVSIA ASIVPLAMQH PAIAATHVDN PYAGATFFVN PYWAQEVQSE AANQTNATLA AKMRVVSTYS TAVWMDRIAA INGVNGGPGL TTYLDAALSQ QQGTTPEVIE IVIYDLPGRD CAALASNGEL PATAAGLQTY ETQYIDPIAS ILSNPKYSSL RIVTIIEPDS LPNAVTNMSI QACATAVPYY EQGIEYALTK LHAIPNVYIY MDAAHSGWLG WPNNASGYVQ EVQKVLNASI GVNGIDGFVT NTANYTPLKE PFMTATQQVG GQPVESANFY QWNPDIDEAD YAADLYSRFV AAGFPSSIGM LIDTSRNGWG GPNEPTGPST ATDVNTFVNQ SKIDLRQHRG LWCNQNGAGL GQPPQASPTD FPNAHLDAYV WIKPPGESDG TSAASDPTTG KKSDPMCDPT YTTSYGVLTN ALPNSPIAGQ WFPAQFDQLV ANARPAVPTS TSSSPPPPPP SPSASPSPSP SPSPSSSPSP SPSPSSSPSP SPSPSPSPSS SPSPSPSSSP SPSPSPSPSP SSSPSPSPSS SPSPSPSPSP SPSSSPSPSP TSSPVSGGLK VQYKNNDSAP SDNQIKPGLQ LVNTGSSSVD LSTVTVRYWF TRDGGSSTLV YNCDWAAMGC GNIRASFGSV NPATPTADTY LQLSFTGGTL AAGGSTGEIQ NRVNKSDWSN FTETNDYSYG TNTTFQDWTK VTVYVNGVLV WGTEPSGTSP SPTPSPSPSP SPSPGGDVTP PSVPTGLVVT GVSGSSVSLA WNASTDNVGV AHYNVYRNGV LVGQPTVTSF TDTGLAAGTA YTYTVAAVDA AGNTSAPSTP VTATTTSPSP SPTPTGTTVT DCTPGPNQNG VTSVQGDEYR VQTNEWNSSA QQCLTINTAT GAWTVSTANF SGGTGGAPAT YPSIYKGCHW GNCTTKNVGM PIQISQIGSA VTSWSTTQVS SGAYDVAYDI WTNSTPTTTG QPNGTEIMIW LNSRGGVQPF GSQTATGVTV AGHTWNVWQG QQTSWKIISY VLTPGATSIS NLDLKAIFAD AAARGSLNTS DYLLDVEAGF EIWQGGQGLG SNSFSVSVTS GTSSPTPSPS PTPTPSPTPT PSPSPTPSPS PTSSPSSSGV ACRATYVVNS DWGSGFTATV TVTNTGSRAT NGWTVAWSFG GNQTVTNYWN TALTQSGASV TATNLSYNNV IQPGQSTTFG FNGSYSGTNA APTLSCTAS
|
| |