| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0574 |
|---|
| Symbol | |
|---|
| ID | 4485238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 603976 |
|---|
| End bp | 604737 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639729341 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_872333 |
|---|
| Protein GI | 117927782 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.391885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAGA GTCAAGGACC GTCATCGGGT GTAGAGATCT CAGCGCAGCA TCGCGGACGC
ACCCGCGAAG CTCGCTATCG GGAGATAGAA CGCTATCTCC GCGAACTGAT CGCCTCGGCC
AAACCAGGTG ATCGTCTACC AAGCGAAGCC CAATTGTGCG CCCGCTTCGG CGTAAGCCGC
ATGACGGTAC GACAAGCGCT GGGAGAACTG GAGCGGGACG GCAGCATCGA GAGAAGTCAG
GGGCGAGGCA CCCTGGTCGC GGTGCGACCG ATGCACCGAG TACCCGGAGT CTTCCTGTCC
TTCAGCGAAG AGATGGAAAG GCGCGGGTTG AAGCCCAGCT CCCGCCTGAT CTCCGCCGGG
TTGGAGCACG CACGCCCGAC GGAGGTTGCC GACTTGAGAT TGGGTCACCA AGACCGCGTC
GTCCGAATCG TTCGGGTACG GCTCGCAGAT GGTGTACCAG TCGCGCTTGA AGATGCTGCG
CTTCCCGAGC GGTACACCTT TGTGCTTGAC GCCGACCTTA CCAATGGCTC CTTACATAAA
GCGCTGGAAG CACGTGGAAC AATCGCGTCT CGAGCAGTAG GTACTATTCA TGCTCGACTG
GCTCGTTCGA GCGAGGTCGG CCTCTTGGAC TTACCGCCAA ATGCCGCCCT CCTGGTGGAG
ACGCGGCTAC TTTTTGATCA AAATGGCTTA CCGTTTGAGC GTACCGAAAC GCGTTACGTT
GCTGACAGGT ATGTCATTGA CGTCGTCCAT ACACATCCCT GA
|
|---|
| Protein sequence | MTKSQGPSSG VEISAQHRGR TREARYREIE RYLRELIASA KPGDRLPSEA QLCARFGVSR
MTVRQALGEL ERDGSIERSQ GRGTLVAVRP MHRVPGVFLS FSEEMERRGL KPSSRLISAG
LEHARPTEVA DLRLGHQDRV VRIVRVRLAD GVPVALEDAA LPERYTFVLD ADLTNGSLHK
ALEARGTIAS RAVGTIHARL ARSSEVGLLD LPPNAALLVE TRLLFDQNGL PFERTETRYV
ADRYVIDVVH THP
|
|---|
| |