| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0458 |
|---|
| Symbol | |
|---|
| ID | 4484779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 490713 |
|---|
| End bp | 491906 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639729225 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_872218 |
|---|
| Protein GI | 117927667 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGCA CGTTGTCGAC GTATCGCGAT CTACTGCGTA CGCCGTCCGT GCTCTGGCTC
CTCGGCACCT CCATCCTCGG CCGGTTCAAC CAGGGAATGG TCGGTCTCGC GCTGCTCCTG
CTTGTCACCG AGCACGCGAG CTATGCGATC GCCGGCGCGG TCTCGGCCTG CTATCTCGCC
GGTTCCTTCG TCGCCGGGCC GGCGCTCGCT CGTCTCGCTG ACGACCGTGG ACGCCGTCCG
GTGCTCGCCG TCAGCGCGGT TCTCTTCGGT ATCGCGATGA TCACACTGGC GGTCGTGCCG
CCGCGGCCCG CACTGCTCTG CGTCGTCGCG GCCGTCGCCG GACTCTGCGT GCCGCCCGTG
ACCGCCTCGA TCCGCGCCGT GCTGCCGGCG CTGGTCACCC CGGAGCAGCG CCGCAGCGTG
TTCGCGCTCG AATCCACCAT CCAGGAACTG ATCTTCATCC TCGGTCCGCC GACGACCGCC
ATGCTGGCAA CGGCCGGCGG ACCCCGGCTG GCCGTCGCTG CGGCCGGCCT CCTCGTGCTT
GTCGGCACCC TCGGTTTCGT GAAGGACCCG GCAGCGGACG CCGGGCGGCA CCCCACCGAG
CGGCAGGCAG CCGGGGGAGT GCTGCGCGTC TCCGGCATCC CCGGTGTCAT TGCCGCCGGC
ACCGCCCTTG TCGCGGCGTT TCAGGCCGAG ACGGTCGGCG TCGTCGAATT GATCAGCGGC
CGTCATGCCT CGGCCAACGC GGCCTACACC CTTGCGGTGG TCAGTCTCGG ATCGATGATT
GGCGGCCTCT TCTACGGGAC CCGCCATCGG CACCGAGCCG AGCTGCGGCA CCTGCTCGCA
CTGGTCGCGG CAGGGCTCGC CCTGGTGCTG ATCGCGCCCA ACCGTCTGGT GCTGACGGTC
CTGCTCTTCT GCTGGGGGCT CACCATCGCC CCAGCCCTCT CCCGGCTCTT CGAGCGGCTC
GCCGCCCTTG CTCCGGCGGC GGCGCGCACG GAGGCTTTCG GGTGGATGGG CAGCGGCCTG
ACCGTCGGTG CCGCGCTCGG TTCCGCGCTC GGTGGGATCG TCGTCGCGGC GGCCGGGGGA
CGTGCGTCCA TCGGCCTCGC CGTCGCTTTC ATTGCGCTCT CCGCCGCGAT CTGCGAACCG
TGGCCGCGGC GGCGCCTGAT GGGGCAACTG CGCGCCGCGT TCCGGCGTCC CTAG
|
|---|
| Protein sequence | MRRTLSTYRD LLRTPSVLWL LGTSILGRFN QGMVGLALLL LVTEHASYAI AGAVSACYLA
GSFVAGPALA RLADDRGRRP VLAVSAVLFG IAMITLAVVP PRPALLCVVA AVAGLCVPPV
TASIRAVLPA LVTPEQRRSV FALESTIQEL IFILGPPTTA MLATAGGPRL AVAAAGLLVL
VGTLGFVKDP AADAGRHPTE RQAAGGVLRV SGIPGVIAAG TALVAAFQAE TVGVVELISG
RHASANAAYT LAVVSLGSMI GGLFYGTRHR HRAELRHLLA LVAAGLALVL IAPNRLVLTV
LLFCWGLTIA PALSRLFERL AALAPAAART EAFGWMGSGL TVGAALGSAL GGIVVAAAGG
RASIGLAVAF IALSAAICEP WPRRRLMGQL RAAFRRP
|
|---|
| |