| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0404 |
|---|
| Symbol | |
|---|
| ID | 4486626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 420664 |
|---|
| End bp | 421152 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639729171 |
|---|
| Product | GtrA family protein |
|---|
| Protein accession | YP_872164 |
|---|
| Protein GI | 117927613 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTCA TCCCCGCCCT CTACCGTCGT TTCGCGCAGC TCGTCCATGA AGTGGCCAAA
TTCGGCGTCG TCGGGCTGCT CGCCTTCGTC GTGGACGTCG GCTTGTTCAA TGTGCTCCGG
GGCGACGGCG GTCCGTTGCA CAACAAGGTC ATCACGGCCA AGGCAATCTC GACGGCGGCG
GCGGCAACGT TCGCGTACTT CGCCAACCGC CATTGGACGT GGCGGCATCG GGCCCGCACC
GGGATCCGGC GCGAGTACGT GTTGTTCTTC GTGTTCAACG GGATCGGTTT AGCGATCGCC
GAAGCCTGCC TGGCTATTTC GCATTACGGG CTCGGTTTTC ACAGCAAACT CGCCGACAAC
ATCTCGGCGA ACGGAATCGG CCTGGTGCTC GGCACACTCT TCCGGTTCTG GTCGTATCGA
CGCTGGGTGT TCCTCGCGCT CGACGAACCG GAACGGTCCG AGCAGGCCGC GGGTGCGGCC
GTCGTCTGA
|
|---|
| Protein sequence | MNVIPALYRR FAQLVHEVAK FGVVGLLAFV VDVGLFNVLR GDGGPLHNKV ITAKAISTAA
AATFAYFANR HWTWRHRART GIRREYVLFF VFNGIGLAIA EACLAISHYG LGFHSKLADN
ISANGIGLVL GTLFRFWSYR RWVFLALDEP ERSEQAAGAA VV
|
|---|
| |