Gene Acel_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0352 
Symbol 
ID4485891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp363786 
End bp364799 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID639729119 
Productinner-membrane translocator 
Protein accessionYP_872112 
Protein GI117927561 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.131259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGT TGGTACGCGA ACGACCACCG GTGACCGGTC GGCGGAGCGG TTGGAACGTA 
CGCCGATGGG CGACCGCCTG GTCTTCGCAG CTTGGTATCA CGGCCGCCTT TGCGGTCGTC
TGGCTCGTCT TCACGGTGCT CGCGCCGGCG ACTTTTCTCG GGTCCCGAAT TTATGTGTCC
TATGCGCAGA CCGTGCCGTA CTTCGGCATC ACCGCATTGG CCCTCACCAT GCTCATCATC
GCGGGAGACA TCGACCTGTC TTTCCCGGCT GTCTTCGCAC TGGGCATGGT CGGGTATGTC
GCCGTTGAGC ATACGACCGG AAACGTCACG CTCGGCCTGC TCACCGCGCT GGCGATCGGC
GCCGCCGCCG GACTCATCAA CGGCGTCTTC GTGACAGTAT TCGGAATTCC AGCACTCGTC
TTGACGATCG GCACGCAGTT TCTCTACCGA GGGCTGACTC TCGTCCTCGT CAACGGCAAG
AGCTACACGC TCACCGAAAC CAGCGGGACG GTGGCATCCC GGCTGCTCGT CGGCCGCTTC
CTCGGGATTC CCATGCAGTT CGTCTGGTTC GCGGTGCTGG CCGTCGTGTG CTGGATCCTG
CTGTATCGCC ATCGCCTCGG CCACAATGCG CACGTCATCG GCGACAACAG CCAAGCGGCT
GCGCTGATGG GCGTGCCGAT CGCCCGGACC CGGATGATTC TCTTCTTGCT GACCGGTCTT
GCGGCGGCGT TCGCCGGCGC CATGAACAGC TTCGCCGTGC TGAACTTCTA CCCGGGTCAA
GGCGACGGGT ACTTGCTGCC CGCCCTTGCC GCTGTCTTCG TCGGCGGAAC ATCCGTCTTC
GGCGGCCGCG GGACGGTCTG GGGAACGTTC ATCGGAGCAT TTCTCATCGG CGGCATCGAG
GCAGGAATCG TCGCCGTCGG ATTGGAGGAG TTCTACTCCC AACTTCTTTA CGGGTGCATC
ATCACCGCCG CCATCACCAT CCACGCGGTT CTGCAACGGA GATTTTCCCA CTAG
 
Protein sequence
MTTLVRERPP VTGRRSGWNV RRWATAWSSQ LGITAAFAVV WLVFTVLAPA TFLGSRIYVS 
YAQTVPYFGI TALALTMLII AGDIDLSFPA VFALGMVGYV AVEHTTGNVT LGLLTALAIG
AAAGLINGVF VTVFGIPALV LTIGTQFLYR GLTLVLVNGK SYTLTETSGT VASRLLVGRF
LGIPMQFVWF AVLAVVCWIL LYRHRLGHNA HVIGDNSQAA ALMGVPIART RMILFLLTGL
AAAFAGAMNS FAVLNFYPGQ GDGYLLPALA AVFVGGTSVF GGRGTVWGTF IGAFLIGGIE
AGIVAVGLEE FYSQLLYGCI ITAAITIHAV LQRRFSH