Gene Acel_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0113 
Symbol 
ID4484556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp116532 
End bp117749 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID639728876 
Productmajor facilitator transporter 
Protein accessionYP_871875 
Protein GI117927324 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG ACACCGCCGA ACCAGCGACG GCGCGTGTGT CTTACCCGCG CGACCGCATT 
ACGTGGCTCG CGTACACCCA ATTCGCGCTG TACGGATATT TCCTCTACGC CTTCACCCCG
GCGGTGAACC TGCTCCGCTC GGACGAGCAC GTCAGCCGGG CCGTCGCCGC CCTCCACGGC
ACTGGGATGG CCGTCGGTGG CGTCCTGGTC GGAATCCTCG CGCCCCCGCT CATCAACCGG
CTCGGACGAC GCCGGCTTTT GTGGTCCGCA CTGGCCGCAA TGTGCGCCGG AATAGTCCTG
CTGGTGGTAG TGCCGCTCCT CCCACTCACC CTTGCCGGTT CGATTCTTGG CGGTTTCGGC
GGCGTCCTGC TCGGCAATCT CAGCACCGCC ATCCTCAGCA GCCACCATCC GGGACCGGCC
GGCGCCGCGG CGGTCACCGA GGGAACCGGG ATCGGCTCCG GCATTGGGCT CCTCGCTCCG
CTTGCGCTCA GTGGTGCCAT CGCGACCCAC CTCGGCTGGC GGGCGGGAAT GCTGATCCTG
GTGGCCTGCG CCGGTGGCGC GTTCCTCGTC TTCGCCCGGT CAACCACCCC GCCGGAACCG
ATCCCTACCC GCCGCGGCAC CCCACGACCT CGGATGCCGG GCAGATTCTG GATCGCCTGC
ACTGTGCTCA TCCTCACGAC GTCCATCGAG TTCTCCATGA CGATCTGGAC GTCGGACGTC
CTGCACAGTC ACGTCGGCGC CTCGACAGCG TCGGCGACCG CCGGGGTGAC GCTCATCGTT
CTCGGCATGA CGGTAGGACG GCTCACGGCG AGCCCGCTCG CGCTGCGATA CTCCGCCGAC
TGGCTCCTCG CAGGCGCCTT CGTGCTGACA CTTATCGGAT TCGGCGTCTT CTGGAACTCG
CATCACCTGC CGGTCGCCTA CCTTGGCCTC TTCCTCACCG GGCTGGGTAT CGCCCTGCAC
TACCCGCTCG CCATCGCCCG GATCGTCTGG GCCTCCGACG GTCACCCCGA TTTGGCGACC
AGCTACGCCT CGCTCGGCGG CGGTGCGGCG ATCGGGCTCG CGCCCTTCGC CCTCGGCGCA
CTCGCCGACC ATGTCGGCTC GCACACGGCG ATGCTCCTTG TCCCGGTCTT CACCCTCCTC
GGGTTCCTCG CGGTCGCCGC CTCCCGTACC CCGTCGCCAC GGCGGAGTCA GCTCGTCAGC
TCGGCTGTGC GAAGCTGA
 
Protein sequence
MTEDTAEPAT ARVSYPRDRI TWLAYTQFAL YGYFLYAFTP AVNLLRSDEH VSRAVAALHG 
TGMAVGGVLV GILAPPLINR LGRRRLLWSA LAAMCAGIVL LVVVPLLPLT LAGSILGGFG
GVLLGNLSTA ILSSHHPGPA GAAAVTEGTG IGSGIGLLAP LALSGAIATH LGWRAGMLIL
VACAGGAFLV FARSTTPPEP IPTRRGTPRP RMPGRFWIAC TVLILTTSIE FSMTIWTSDV
LHSHVGASTA SATAGVTLIV LGMTVGRLTA SPLALRYSAD WLLAGAFVLT LIGFGVFWNS
HHLPVAYLGL FLTGLGIALH YPLAIARIVW ASDGHPDLAT SYASLGGGAA IGLAPFALGA
LADHVGSHTA MLLVPVFTLL GFLAVAASRT PSPRRSQLVS SAVRS