| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0040 |
|---|
| Symbol | |
|---|
| ID | 4484535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 44861 |
|---|
| End bp | 45496 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639728802 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_871802 |
|---|
| Protein GI | 117927251 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.970085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGAT CCGGCCCTTC CCGAGCGCCG CGGACCGGAC ACGAGGTTCG CCGGACCCGT
ACCCCGTGGG GAACGATTTC GCGTGAGACC GTCGTCGACG CCGCGATAAA AGCGGTCACG
TCCGGCAATT ACGAGGACAT GAGCATCCGC AGCCTGGCGG CCGATCTCGG TGTCGCACCG
ATGACCCTTT ACCGGCACGT GCGGGACAAG GATGATCTGC TCGACGAAGT CGTGGACCGC
CTTCTTGCGC GTGTCTGGAA GCCGACGGTC TCGCGCAGCG ACTGGAGGGC GTGGATCATC
CAGGCGGCTG ACAAGCTCCG GCGGTTCCTC GTCACGTCAC CAGTCGCACT CTACGTTTAC
CTTCGCCATC CCGTCGTGAC GCCGACTGCT ATCCGCCGCA TGACGGCGAT GCTCGCCGTC
CTCCGGCAGG GCATAGGTGA CGAGGAGAAG GCGCGCCGGG CGTACGCGGT CATCCATGCG
TACACCCTCG GCTTTGCCGC ACTGGAGGTC GCCCGATCCG GATGGTCATC TGCGGAAACG
ACGGTTGACG AGGTGACCCG CGAAGTAGCG GCTTTCATCA GCCCCCGCCA ATTCCGCGAC
GGACTCGGGT ATCTCCTTGA CGGAATTGCC GGCTGA
|
|---|
| Protein sequence | MPRSGPSRAP RTGHEVRRTR TPWGTISRET VVDAAIKAVT SGNYEDMSIR SLAADLGVAP
MTLYRHVRDK DDLLDEVVDR LLARVWKPTV SRSDWRAWII QAADKLRRFL VTSPVALYVY
LRHPVVTPTA IRRMTAMLAV LRQGIGDEEK ARRAYAVIHA YTLGFAALEV ARSGWSSAET
TVDEVTREVA AFISPRQFRD GLGYLLDGIA G
|
|---|
| |