Gene Acel_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0025 
Symbol 
ID4484685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp24805 
End bp26808 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content66% 
IMG OID639728785 
Productkelch repeat-containing protein 
Protein accessionYP_871787 
Protein GI117927236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACC GATCTGAGCA CGGTCGATTG ATACGGACGA GCATCGCTGC CGCGGTGGGA 
TTGAGCCTTG CGGTGACCGG GTGTACGGCG TCCCGGCAGC ATTCGGCCGC CACCGTCGAG
CAGCATGCGC CCACAGCACC GGTTGCCCCG CAACCGACCC CGACGGCGAA CGCCAATCCA
GGCCCCGAGC CAGCCCTCGG CGCGACCACC CTCCCAGTCC GATTGCCGAC TCCGCTGTCG
CGACTCGGCG CGGTCCCCGT GAATCACCGC ATTCTCCTCG TCGGCGGTCT CTTGGCGAAT
CAACAGACGA CGTCAAGCAT CGAAGTCTTC GATCCACGCG CGATGACCGT CAGCTCCGCG
GGTCACCTGC CCACTCCGAC ACACGACGCC GGCTCAGCAT TGCTCGGCGA TCACGCAATG
ATCGTTGGCG GTGGGTCCGC CAGCTCCACC TCGACGGTTC AGGCGGTGAG CCTGACGGGA
ACGGCGTCGA TCTCGGGGAA CCTTCCCGCA CCACGCTCCG ATGACGCCGC GGCGTCCGAT
GGCGCCACGC TGTACATTGT CGGAGGCTAC GACGGCGCGC GCGAACTGCC TGACATCCTC
GCGACCACCG ACGGCCGAAC GTTTCGCCCG GTCGGCCGCC TCGCCGTAAC CGTGAGATAC
GCCGCCGCGT ACGTCGACGG CAACTCATTA TGGATTTTCG GCGGTGAGCA CAACGGCCAA
CCGACGACCG ATATACAACG GTTCAATAGA CAGACCGGGC AGACCTCCAT TGCCGCCCAC
CTCCCCAGAC CGCTCGCCCA CGAAGGGGTG GCCGTGATCG GAGGTCACAT TCTGCTCCTC
GGCGGCACGG ACGGTTCACA CCCGCAGAAC ACCATCTACT CCTTCGATCC GACGACCGGC
GCCGTCACCG TCGTAGGTTC CCTGCCGGAG GCCGTCTCGG ACATGGGGGT CAGTGTCGTC
GATCAGACGG CCTACATCAT CGGCGGCGAA GCGCTCACCG CGGAACAGAC CGTCGCGCCG
ACGACCGCCA TCGTCGCCGT CGCGTACCGC GATGTCACCC CAGCCGCGCA GTCGACCGGC
TCGCCGAATC CACCGTTCGA CGGTCACCTG CTCATCGCGG ACCGCGGCAA CAACCGGCTG
CTTCTCGTCG ACGCCCGCGG CCACATCGTG TGGCAGTTTC CCGCACAAGG CGCCGCCGCG
TCGTCGTTCT ACTTTCCCGA CGACGCGTTC TTCGTCGACC ACGGCCGGGC GATTCTTTCC
AACCAGGAGG GAAACAACAC GATCATCGAG ATCGCGTATC CGACCGGCCA GACCCTCCGG
TCTTATGGAA AACCCGGGGT CGCCGGCAGC GGCGCCGGCC TCCTGCACGA ACCCGACGAC
GCCTACCGGC TGGCCAATGG GCTCACCACC GTCGCCGACG CCAACAACTG CCGGGTCCTC
GTCATCGGCC AAGACGGCCG GATCGTCCAC CAGATCGGCC GCACCGGCGA CTGTGTGCAC
CGACCCCCGG TCTCCCTCGG CTATCCCAAC GGCGACACGC CGCTGCAGGA CGGGAACCTG
CTGATCTCCG AGGTCAACGG CTCGTGGATC AGCGAGTACA CCCTCACTGA CCGACTAGTT
TGGACGGTGC ACCTCCCGTT GACCTATCCA TCGGACCCGC AACAAATCGG CCCAGACCGC
TACATCGTGG CCGACTACGC CAAACCTGGC GCGATCATCG AGTTCGACCG GGCCGGGCGC
ATCCTCTGGG AGTATCGCGT CACGGCCGGC CGGGGAATGC TCGACCACCC AAGCCTCGCC
GAAGTACTGC CCACCGGATT CATCTGCGTC AACGACGACT ACCGGCACCG CGTCGTCATC
ATCGACCCGT CCAGCCAGCA GATCGTCTGG CAGTACGGGA TCGACGACAC ATCCGGGACC
GCACCCGGTC TCCTCAACAC CCCCGACGGT TTCGACCTGC TCGGACCCGG CGGCACCACG
CCGACGCATC CGTGGACCGG TTGA
 
Protein sequence
MPHRSEHGRL IRTSIAAAVG LSLAVTGCTA SRQHSAATVE QHAPTAPVAP QPTPTANANP 
GPEPALGATT LPVRLPTPLS RLGAVPVNHR ILLVGGLLAN QQTTSSIEVF DPRAMTVSSA
GHLPTPTHDA GSALLGDHAM IVGGGSASST STVQAVSLTG TASISGNLPA PRSDDAAASD
GATLYIVGGY DGARELPDIL ATTDGRTFRP VGRLAVTVRY AAAYVDGNSL WIFGGEHNGQ
PTTDIQRFNR QTGQTSIAAH LPRPLAHEGV AVIGGHILLL GGTDGSHPQN TIYSFDPTTG
AVTVVGSLPE AVSDMGVSVV DQTAYIIGGE ALTAEQTVAP TTAIVAVAYR DVTPAAQSTG
SPNPPFDGHL LIADRGNNRL LLVDARGHIV WQFPAQGAAA SSFYFPDDAF FVDHGRAILS
NQEGNNTIIE IAYPTGQTLR SYGKPGVAGS GAGLLHEPDD AYRLANGLTT VADANNCRVL
VIGQDGRIVH QIGRTGDCVH RPPVSLGYPN GDTPLQDGNL LISEVNGSWI SEYTLTDRLV
WTVHLPLTYP SDPQQIGPDR YIVADYAKPG AIIEFDRAGR ILWEYRVTAG RGMLDHPSLA
EVLPTGFICV NDDYRHRVVI IDPSSQQIVW QYGIDDTSGT APGLLNTPDG FDLLGPGGTT
PTHPWTG