Gene Shewana3_4061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4061 
Symbol 
ID4480275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4880912 
End bp4881862 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content51% 
IMG OID639728676 
Producthypothetical protein 
Protein accessionYP_871684 
Protein GI117922492 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT CATCGATAGT CTCGCAACTT AAGCAACCCC ATCGCCTTGT GTTTGTCTGC 
GCTGCGCTAC TGTGTCTCGC GCCTGTTATC TCATCCCCTA TGGCGCTTGT GCTCGGTTTT
ACCTTGGCCA GCCTAGGTTG GGTGCCAAAC GACTGGAATA TCGCCGCCCT CACCAAAAAA
TTACTGTCCT ATTCGATTAT TGGTTTAGGC TTTGGGATTA ACTTCAACGC CGCGATTGAG
GCCAGCAGCC ATAACCTCGG ATTAATTGTC GGCTCGATTA TTTTTACGCT GATCTTGGGC
TTTTTGGTGA CTCGCGCTTT AAAGTTTGAC CCGATCACAG GGCACTTAAT CGCCTCTGGC
ACCGCCATCT GTGGCGGCAG CGCCATTGCT GCCGTATCGC CCGCCATTAA TGCCAAACCA
GACCAAACCG CTACCGCATT AGCCTGTGTA TTTGTACTCA ACTCGGTGGC TTTGTTTTTA
TTCCCCGCCC TCGGGCATTT GCTCAATATG AGCCAATACG ATTTTGGCGT GTGGAGTGCC
ATCGCGATTC ACGACACCTC CTCAGTCGTC GGCGCGGCCT CGGCCTATGG TGATGAAGCA
CTTAAAACCG CCACCACCAT TAAACTGGCG CGCGCACTAT GGATTATCCC TATCGCCCTT
GTCAGTGCGC TGATCTTTGG CGGCAATAAA CGTAAGCTTA ACCTACCGTA TTTTATCGGA
TTTTACTGTT TAGCCATTGC AATCGCCCAT TGGTTGCCGC AGTTTCAGCC GCTCTACGAC
ACGCTTTTTA TGGTATCGAA ACGTACCTTA GTTCTGTGTC TGTTCTTGAT TGGCGCGGGG
ATTACGGTGC AAAAAATGCG GGCAAGCGGC CCTAAGCCTT TGCTGCTGGG CGTGATCCTG
TGGGCGGCGA TTGGGGTAAC GTCTTTAGGT TATATTCTGT ATTTTCAATA G
 
Protein sequence
MNFSSIVSQL KQPHRLVFVC AALLCLAPVI SSPMALVLGF TLASLGWVPN DWNIAALTKK 
LLSYSIIGLG FGINFNAAIE ASSHNLGLIV GSIIFTLILG FLVTRALKFD PITGHLIASG
TAICGGSAIA AVSPAINAKP DQTATALACV FVLNSVALFL FPALGHLLNM SQYDFGVWSA
IAIHDTSSVV GAASAYGDEA LKTATTIKLA RALWIIPIAL VSALIFGGNK RKLNLPYFIG
FYCLAIAIAH WLPQFQPLYD TLFMVSKRTL VLCLFLIGAG ITVQKMRASG PKPLLLGVIL
WAAIGVTSLG YILYFQ