Gene Shewana3_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4058 
Symbol 
ID4480272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4876578 
End bp4878098 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content37% 
IMG OID639728673 
ProductKAP P-loop domain-containing protein 
Protein accessionYP_871681 
Protein GI117922489 
COG category[R] General function prediction only 
COG ID[COG4928] Predicted P-loop ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG ATATTGTAGA TTTTAACTGG AAAGAGCCCG TGTTATGTGC AGAAGGAACT 
GAATTATTTC CAAGAGATAC ATTAGATCGC GCTAGATACG CTTCTTTTTT ACACAATTAT
TTGGCGATTA ATGCTATCGA TGGTGGCTAT GTTTTAAACC TAAATGCGAA GTGGGGCTCG
GGTAAAACCT ACTTTATTAA TCGCTGGATT GAGAGCATTA AAGATACGCA CCCTGTTGTT
TACATTGATG CATGGAAGCA GGATTACTCT GATGATCCTA TGCTTACCGT TATTTCATCT
TTGATAAATG CTTTAAGTGA GCAACTGCCT CCTGAAAATA AAGCTGTAGT AAATATTGCC
AAGAAATCTG CGCGTTTTAT CAAGGCCGCA GCACCTGCTT TGCTCAAAGG ATTGGTGAAG
AAGGCAACTG GTTTGAATCT TGATGATGTT TCAATCGAAG ACGAAGATAA AATATCGTCT
GAAAATAAAA GTGACGGCAA AGGTTCATCG GATATTTTCG GCGAGTCAGG TGCGGCAATT
GCACAATGCT TAGTGAAGGA CCACAACGAT AAATTGCAGT CAGTCGAATA TTTGCGAAAC
GAAATTAAAG AATTAATTAC TGCAGTTATT GCACATAAGC AAGGTGCTTT AAAAGTGCCA
GCTTTTATCT TTATTGATGA GCTTGACCGC TGTCGACCTA GCTATGCCGT AGAAATGTTG
GAAATTGTTA AACACTTTTT TGAATTAGAT AACATTGCCT TTATCGTGGC GACAGATACT
GAACAATTAC AGCATGCGGT GAAAGCTGTT TATGGTGAAG GCTTTGATGC CCAAACCTAT
TTAGGTCGCT TCTTTAGGCG ACGTTACTCG TTAACTGAGC TTTCACGCTA TGAGTTTGTC
AGCCATATTG TAGAAAGCAA AGTTACTTAC AATCCTAAGT GGAGGGAATT CGTTCCTAGC
TTAGCCGAGT TAGATGACTT CACTAATGTG GTTTCTATTG TGGCGGATAG ATTTAGGCTT
TCTCTAAGAG AAACTGAACA GTTAACGGAA AAATTTATAG CTGTTTTAAG TAATACAACA
AAAACATTAA ATCCTTATTT GCTGCTTGTT TTGTTTGTAA TTAGGGATAA GCACTTCTCT
CTTTATAACG AGTGGGTTGA AGCAACTAAT AAAGACCATG ATTTTTCTCA TTCTATATCA
AGTATTGGAT ATTTTATAGA CGTTTTTCCT ATTTACTATC AGGATGAGGC AGGATTTGTA
CCTAAGGTAG TAACATTAAC GCAAGTCCTT AATTTTGATT TAAGATTAAA TGAATTACTA
GCTGAAATGA ATAAGATGTG TTCTAGTTGG AAGGCAAGAG ATAGGATTAG GTTAGAAAAT
CAATTAGATG ATAAATATAG TAACAGTGCA TCATATCCTG TGAGAGTAGA TTGTAATCGT
CAAGAGAAAT TGTTAAACCT CTCAGCAAGT AAATCGGATT ATAAAAACTG GGTAGAGTTA
GCAGTGTCTT TTGATAAATA G
 
Protein sequence
MSDDIVDFNW KEPVLCAEGT ELFPRDTLDR ARYASFLHNY LAINAIDGGY VLNLNAKWGS 
GKTYFINRWI ESIKDTHPVV YIDAWKQDYS DDPMLTVISS LINALSEQLP PENKAVVNIA
KKSARFIKAA APALLKGLVK KATGLNLDDV SIEDEDKISS ENKSDGKGSS DIFGESGAAI
AQCLVKDHND KLQSVEYLRN EIKELITAVI AHKQGALKVP AFIFIDELDR CRPSYAVEML
EIVKHFFELD NIAFIVATDT EQLQHAVKAV YGEGFDAQTY LGRFFRRRYS LTELSRYEFV
SHIVESKVTY NPKWREFVPS LAELDDFTNV VSIVADRFRL SLRETEQLTE KFIAVLSNTT
KTLNPYLLLV LFVIRDKHFS LYNEWVEATN KDHDFSHSIS SIGYFIDVFP IYYQDEAGFV
PKVVTLTQVL NFDLRLNELL AEMNKMCSSW KARDRIRLEN QLDDKYSNSA SYPVRVDCNR
QEKLLNLSAS KSDYKNWVEL AVSFDK