| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4052 |
|---|
| Symbol | |
|---|
| ID | 4480266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4869032 |
|---|
| End bp | 4869820 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639728667 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871675 |
|---|
| Protein GI | 117922483 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTT CACTTCATCC CATCCTTAGT GCCGTCGGCG TGATTAGCGT CATTTACTTG
AGTCACCCGT GCTTGGCGAA CGAGAGCTTA GTGCAAACCG AAGGTGTCTC AAGCAGCGTA
TTACCCGCAG CAACCACAGC ACCTTGGGCC GCGAATCTAG ACTTAGGTTG GGATAGCAAA
TATGTGTCCC AAGGACGTAA CAATCTGGCC GAGGGCGGAA TTTATTGGCT AAATGCTAGC
GTCCAATACG GCAATCTCAC CACCTACGCC CTGGTCGGAC GCGGCGATAG CCAAGCCTAT
ACCGAGTGGA ACATTGGTCT CGAATACGCG TTAAACCTCA GCGAACACTT AGAGGCGAAT
CTGGGCTATC AGCGGATTGA AGGTTATAGC AGCAGTCGCT GTCAGGATAA CGAACTGTTC
GCAGAATTAG CCTACACCGC CGCCCCTTGG TTAGTGCCTT CGGTGAGTTA TGTGTATTCC
ACCGAGGCTG CCGGCTATTT TGTCGAGCTG AGTCTACACA GTTATTGGCA ACTGAGTGAA
GGCTTTACTC TCGCGCCTTA TATTACCCAA GGACTTGATT TTAAATATCG AACAGAAGAC
CACAATGGCC GCAATCACCT CCAATTTGGT TTAGAAGCCA ATTATGATCT GGCCGATAAT
ATGAGTCTCA GTGGCCATAT TAGCCACAGC ATTGCCCAGA ACGATATTGA GCAAGAAGCG
GCCACCAACG GCGACTTTAG CTCGCAAGAT CAAACCTATG CGGGTGTCCA CTTTAATATG
AGTTTCTAA
|
|---|
| Protein sequence | MAASLHPILS AVGVISVIYL SHPCLANESL VQTEGVSSSV LPAATTAPWA ANLDLGWDSK
YVSQGRNNLA EGGIYWLNAS VQYGNLTTYA LVGRGDSQAY TEWNIGLEYA LNLSEHLEAN
LGYQRIEGYS SSRCQDNELF AELAYTAAPW LVPSVSYVYS TEAAGYFVEL SLHSYWQLSE
GFTLAPYITQ GLDFKYRTED HNGRNHLQFG LEANYDLADN MSLSGHISHS IAQNDIEQEA
ATNGDFSSQD QTYAGVHFNM SF
|
|---|
| |