Gene Shewana3_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3959 
Symbol 
ID4480173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4758190 
End bp4758666 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content50% 
IMG OID639728575 
ProductAsnC family transcriptional regulator 
Protein accessionYP_871583 
Protein GI117922391 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCG CGCTTTTTTA CAACCCGTTT TTATCGGAGC TCAAGTTGGA TAAGTTTGAT 
ACCGCCATCA TCCACAGCCT GCGACAAGAT GCACGCCAGA GTGTCTCCAG TATCGCTGAG
CAGGTTAACC TTTCCCGTAG TGCGGTTGCC GAGCGGATTA AAAAACTCGA GCAAACTGGG
GTGATCCGCG GCTATCAGGT TTTGCTGAGC GAATCGCAAA AGGAAGGAGT ATCGGCTTAT
TTCGAAATCC AGCATAAATG CCCGCGCTGC GCCGATGTGG TGCATGTGTT CCATGCTATC
CCCGAGGTGA TCACTTGTCG CGGTATCTCT GGCGATATGG ATTTACTGGT GTATGTGCAC
GCCCCGTCGA TGCGCCGCTT GCATGAAATT CGTGAATATA TCGATACCCA CACGGACATC
ATTAAAATTA AAACCCATGT GGTGATGAGC GAGTGGATAA ATAACGCGGG TGAATAA
 
Protein sequence
MCLALFYNPF LSELKLDKFD TAIIHSLRQD ARQSVSSIAE QVNLSRSAVA ERIKKLEQTG 
VIRGYQVLLS ESQKEGVSAY FEIQHKCPRC ADVVHVFHAI PEVITCRGIS GDMDLLVYVH
APSMRRLHEI REYIDTHTDI IKIKTHVVMS EWINNAGE