| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3887 |
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| Symbol | |
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| ID | 4480098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4667106 |
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| End bp | 4667789 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728500 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_871511 |
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| Protein GI | 117922319 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.379252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAC AGATTAAAGC GATTGCCTTT GATCTCGACG GCACATTGAT TGACAGTGTG
CCCGATCTCG CGGTCGCGAC CCAGGCGGCA CTCGCCGAAT TAGGTTTGGC AAGGTGTACC
GAGGCACAGG TGAGAACTTG GGTGGGCAAT GGCGCTGAAA TGCTGATGCG CCGCGCCATG
AGCCACGCTT TAGGCACAGA TGTTGAGCAA GCGGCATTGG ATGCGGCTAT GCCCATCTTT
ATGCATCACT ATCAAGAAAA CCTTGAGAAG CACAGTGCAC TCTATGCCGA TGTGCACCAA
GTGCTGCAAA TCCTGTTTGA TGCAGGATTT AAGCTGGCGG TGGTGACCAA TAAGCCTTAT
CGCTTTACCT TGCCTTTGCT TGAAGCCTTT AAGATTAATG ACTTCTTTAG CCTAGTGCTT
GGCGGTGATT CGCTGGCGAA GATGAAGCCA GACCCATTAC CGCTCGAGCA TCTATTAGCC
GAATGGCAAC TCGATAAAAG TGAGTTGTTG ATGGTGGGCG ATTCTAAAAA TGACATTTTA
GCAGCGAAAG CGGCGGGTGT TGCATCAATC GGCTTGACCT ATGGCTACAA CTACGGTGAA
GATATTGGGC TCACTGGCCC TGACGCTGTA TGCGAGCAGT TTGCCGAGAT CCTGCGCTGG
CTAAATCTCG CTCAGCCAGT TTAA
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| Protein sequence | MREQIKAIAF DLDGTLIDSV PDLAVATQAA LAELGLARCT EAQVRTWVGN GAEMLMRRAM
SHALGTDVEQ AALDAAMPIF MHHYQENLEK HSALYADVHQ VLQILFDAGF KLAVVTNKPY
RFTLPLLEAF KINDFFSLVL GGDSLAKMKP DPLPLEHLLA EWQLDKSELL MVGDSKNDIL
AAKAAGVASI GLTYGYNYGE DIGLTGPDAV CEQFAEILRW LNLAQPV
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