Gene Shewana3_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3808 
Symbol 
ID4480018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4573700 
End bp4574572 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content51% 
IMG OID639728421 
Producthypothetical protein 
Protein accessionYP_871432 
Protein GI117922240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG ATTTGACCTT AGTCATTATG GCGGCAGGGC TAGGTAGTCG TTTTGGCGGC 
GATAAGCAAT TGGCCTCCCT CGGCCCTGCG GGCGAACCCA TGTTGGTGTT ATCGATACAG
TCGGCGATTC GCAGCGGATT TAAGCGTGCC GTGATGGTGA TCCGCCCCGA ATTGGAAGCG
GAACTCTGCG AGCTGTTGAC ACGGTTTTTA CCGGCGGACT TTGAGTATCA CTTTTGTTAT
CAGTCGCTCA CTGATTTACC CGACGAAGCG CAGCTTACGG ATGTGAGCTA TCGTTTAAAG
CCCTGGGGAA CGGCACATGC CCTGTGGTGC GCCCGTGATA GTGTCAATGG GCCTATGGCG
GTGATCAATG CCGATGATTT TTACGGCGAC AGCGCTTTTG CTTCTTTAGC GAAGGGATTA
ACCGCAAGAC CTAACGATTG GATGATGGTG GCTTATCCGA TTGAGCTGAC CTTGTCCGAG
CACGGTGGCG TGAATCGTGG CTTATGCCAA GTGGAGCTGG GGCAACTGCG TTCAGTCGCC
GAATGGTTGA ATATTCAAGC TCAAGATCAT GGTTTTATCG GCGAAGGCCC CGAGGGATTA
GCACCGCTTC CTTCACAGTC GCTGGTCTCA ATGACCTGTT GGGGCTTCTC GCTAAGCATA
TTTGATGTTA TTAAACGTGA ATTAACGGTA TTTATCGAAC AACAAGGCCA ATTGCCTAAA
TCTGAATGCT ATTTGCCCGC CGTGGTTCAG GCGGGAATTG AGCAAGGTGT GCCCGTGTTT
GTTGATGTGG CCAGCGAACC TTGGCTCGGT GTGACCTATC CGCAGGATAC TGTCTGGGTA
AAGCAAAAAT TAATGGAGTT ATTGAGTGAT TAA
 
Protein sequence
MNTDLTLVIM AAGLGSRFGG DKQLASLGPA GEPMLVLSIQ SAIRSGFKRA VMVIRPELEA 
ELCELLTRFL PADFEYHFCY QSLTDLPDEA QLTDVSYRLK PWGTAHALWC ARDSVNGPMA
VINADDFYGD SAFASLAKGL TARPNDWMMV AYPIELTLSE HGGVNRGLCQ VELGQLRSVA
EWLNIQAQDH GFIGEGPEGL APLPSQSLVS MTCWGFSLSI FDVIKRELTV FIEQQGQLPK
SECYLPAVVQ AGIEQGVPVF VDVASEPWLG VTYPQDTVWV KQKLMELLSD