Gene Shewana3_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3653 
Symbol 
ID4476252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4390116 
End bp4390604 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content47% 
IMG OID639728259 
Productmethylation site containing protein 
Protein accessionYP_871279 
Protein GI117922087 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGAT TTTCCAGCGG CAGACAGTTT GGGTTTACCT TAGTCGAACT CGTGACCACT 
ATTATCCTGA TTGGGATTCT ATCGGTGACG GTATTGCCGC GCTTATTTAA CCAGTCATCC
TACAGCGCCT TTAGCCTGCG CAATGAATTT ATGGCCGAGC TGCGCCAGGT TCAGCAAAAA
GCCTTGAATA ATACCGATAG ATGCTACCGG GTTGTCGTGT CGGCGACGGG TTATCAAGTG
AGTCAGTTTG CCAGTCGAAA TACCACTGGT TGTACGGGCT CGCCATTGTC TCCTAACCCT
TTATCCAGCC AAGCTTTTCA AGGTGGCGCG CAGCTAGTGC TTATCAGTAA CAATGCCAAG
AGCTTTTATC TTGATTTTGA TATCAATGGT CGAGCATCGC TTGCGTGTAA TGGGCCATGT
ATCAATGTGA TTGCCAATGA TACTGTGGCG ATTAATATCT CCAGCGAGGG CTATATTTAT
GCGAATTAA
 
Protein sequence
MRRFSSGRQF GFTLVELVTT IILIGILSVT VLPRLFNQSS YSAFSLRNEF MAELRQVQQK 
ALNNTDRCYR VVVSATGYQV SQFASRNTTG CTGSPLSPNP LSSQAFQGGA QLVLISNNAK
SFYLDFDING RASLACNGPC INVIANDTVA INISSEGYIY AN