Gene Shewana3_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3557 
Symbol 
ID4476157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4265374 
End bp4265892 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content53% 
IMG OID639728166 
Producthypothetical protein 
Protein accessionYP_871186 
Protein GI117921994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.653735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA TCTTACTGCT TGGCGCAACT CAGTCTCCTC CTAGCAGCTA CATGCTGAGG 
GAGTTAAAAG ACGTGGCTCA GCCCGATCCT GTGAGCTGGT GGCCACAGAC TCTAGGTTGG
CAGATATTAC TGCTGATGTT GCTGCTGTAT CTGGGTTATC GACTGTATCT CAAGGGGATT
TTCTGGTGGC GTAACCGTTA CCGCCAAGAG GCGATAACGG CCTTGCAGAG TCTGTCGGCG
GAGGATCCGC ATTGGCCGAC GCAGATGATG AAGATTATTA AAATCGTGAT GGTCTACTTA
GAGCCGAAAA ACGCCTCCCT ATACGGTGCT CCCTTGCTCG AGCAGATGGG GCGCTACCAT
ACGAAGGCTC AGCTAGCGAA CGATGAATCG TTTCAGCAGT GGCTAAAATG CCTTGAAGAT
CCTAATGCCG CTCGCCCCGA CTTTAGCGTT GTGCGCCAAG GGCTAAGCCT GTGGTTAAGC
GGGCATCACT TGCCGGAGGC AGGCCATGGA TCAGCTTGA
 
Protein sequence
MTAILLLGAT QSPPSSYMLR ELKDVAQPDP VSWWPQTLGW QILLLMLLLY LGYRLYLKGI 
FWWRNRYRQE AITALQSLSA EDPHWPTQMM KIIKIVMVYL EPKNASLYGA PLLEQMGRYH
TKAQLANDES FQQWLKCLED PNAARPDFSV VRQGLSLWLS GHHLPEAGHG SA