| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3541 |
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| Symbol | |
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| ID | 4476141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4241521 |
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| End bp | 4243599 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728150 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_871170 |
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| Protein GI | 117921978 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGC TCCAGACAGT AGCAGGAAAG CGAGCCAAGG TTTATTTATC AGGTATTTGG
TTATTACCCC TCTGTGGTTT ATCAAACCTA GCCATGGCCG ACAGCGCGGA TAATATTGAG
CGTTTAGAAG TGCGTGGCAG GCAAATTAAT ACCTTAGGCC ATAGTACTTC GGCGTCGGAA
GGGATAGTGG GTGCGGCGGA AATCGAGAGT CGCCCGCTAC TGCGCACGGG GGAGATCCTC
GAGTTTGTCC CAGGGATGAT AGTTACTCAG CACAGTGGTT CGGGTAAGGC GAATCAGTAT
TTTCTGCGCG GCTTTAACTT AGACCATGGC ACAGATTTTA ATACCCGTGT CGAAGGTATG
CCGGTCAATA TGCGGACTCA CGGCCATGGT CAAGGTTATA CGGATCTTAA CTTTTTAATC
CCTGAGCTAT TAGGGGAAAT CCGTTATGCC AAAGGGGCTT ATTATCCTGA AGTGGCGGAC
TTTTCCGGCG CGGGTGCGGC GCAAATTCAG CTCGCCGATG AACTCGCTTA TCGCCAAGTT
GGGGTGACCT TAGGGGAATA CGGTTATCAA CGGCTGGTGG CCACTCAGGA TATGAAGACC
GAGGTCGGCC GATTTATTTT AGGAACAGAG TTGCAGACTT ACGATGGCCC TTGGAGTGAT
ATTAAGGAGG ATATCAGCAA GATCAATGTG GTAGGTCGCT ATCTTACCAA GCTCAATGGC
GGGGACTTTA GCCTCACCAT GATGGCCTAC GACAATAACT GGAATTCGGC GGATCAAATT
CCGGCGCGGG CGGTTGAGTC TGGGCTGATT GATTTTTACG GTTCACTCGA CACCGATGTG
GGCGGTGAGG CCAGTCGTTA CAGCATTTCG GCGAATTATG ACGCCGGCAA CTGGCAGGCC
AATGCCTATG CCATACGCTC GACCATGGAT CTGTTTTCAA ACTTTACCTA CTTCTTAAAC
GCTCCCATCA ATGGCGATGA ATTTGAGCAG GTCGATGAGC GCACCATTTG GGGCGGCGAT
ATTAAACGCG ACTGGCAGAT GAGTCTGGCG GGGACACAAA TCAATTACAG CCTAGGTGCC
GATGTGCGCT ACGACGATAT TGGTGCCGTG GGTTTATATA ACACTAAAGC TCGGGAACGC
CTCAGCACTG TGAGGCTCGA TGAAGTGCAG GAGCTCTCCA CTGGATTATT TGGCAAGCTG
GAATGGTTAC CAGCTGACCA ATGGCGTTTA AATGTAGGCT TGAGATATGA CTATTTCGAT
GTGCAGGTCG ATAGTGATAA TCCCCTCAAC AGCGGTGATG CTTCCGATGG CATGTTGAGC
TTAAAGGCGG GCGCTTCCTA CCTAGTGAGC GATAATCTGG AACTCTACAT GAATGCGGGA
CAGGGATTGC ATTCTAACGA TGCCCGCGGT GCAACCATTA AGGTTGACCC TGTTACGGGC
GATCCGGTTG AAAAGGTCGA TTTGTTAGTG CGCTCCAATG GCGGCGAGTT TGGGGTCAAA
TACTATGATC GCGACTTTAT TAACTTCTCG GCGGCGCTTT GGTATTTGGA ACTCGACTCT
GAACTACTCT TCGTCGGCGA TGCGGGCAAT ACCGAACCCA GCCGCGCCTC TGAGCGTTAC
GGCGTTGAAG TTACAGCCTA TTATTGGCTT AACGATGATT TGAGTTTAGA TATGGAACTG
GCCTGGACCC GTGCCCGTTT TACCGAGAAT GAACTCGATG AAGGCAAATA TGTCGATGGT
GCAGTGCCCT TTGTTGGCAG CGCGGGTATT ACCTATCGTC CCGATGGCGA TGGTTGGTAT
ACCAGTGTCA GGCTGAGATA TTTAGGTGAG CGAATTCTCG ATAGTTTTGA TGAGCATAAA
GCCGATGACA CAACCTTAGT GAACCTTGCC CTGGGTTATC AGTTATCGGG CTTCGATACT
AAGCTCGAGC TATTGAATAT ATTTGATAGC AAAGACCACG ATATCGATTA TTTCTACGAA
TCTCGCCTAG CGGGTGAGCC AGCTGAAGGC GTGGAAGATT TGCATTATCA TCCTGTTGAG
CCGCGCATGG TGCGGGTGAG TGTTAGTTAT CGTTTCTAA
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| Protein sequence | MKSLQTVAGK RAKVYLSGIW LLPLCGLSNL AMADSADNIE RLEVRGRQIN TLGHSTSASE
GIVGAAEIES RPLLRTGEIL EFVPGMIVTQ HSGSGKANQY FLRGFNLDHG TDFNTRVEGM
PVNMRTHGHG QGYTDLNFLI PELLGEIRYA KGAYYPEVAD FSGAGAAQIQ LADELAYRQV
GVTLGEYGYQ RLVATQDMKT EVGRFILGTE LQTYDGPWSD IKEDISKINV VGRYLTKLNG
GDFSLTMMAY DNNWNSADQI PARAVESGLI DFYGSLDTDV GGEASRYSIS ANYDAGNWQA
NAYAIRSTMD LFSNFTYFLN APINGDEFEQ VDERTIWGGD IKRDWQMSLA GTQINYSLGA
DVRYDDIGAV GLYNTKARER LSTVRLDEVQ ELSTGLFGKL EWLPADQWRL NVGLRYDYFD
VQVDSDNPLN SGDASDGMLS LKAGASYLVS DNLELYMNAG QGLHSNDARG ATIKVDPVTG
DPVEKVDLLV RSNGGEFGVK YYDRDFINFS AALWYLELDS ELLFVGDAGN TEPSRASERY
GVEVTAYYWL NDDLSLDMEL AWTRARFTEN ELDEGKYVDG AVPFVGSAGI TYRPDGDGWY
TSVRLRYLGE RILDSFDEHK ADDTTLVNLA LGYQLSGFDT KLELLNIFDS KDHDIDYFYE
SRLAGEPAEG VEDLHYHPVE PRMVRVSVSY RF
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