Gene Shewana3_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3523 
Symbol 
ID4476123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4223364 
End bp4224854 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content50% 
IMG OID639728132 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_871152 
Protein GI117921960 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT TGAATTGGTT TATGTGGGGA CTGGATCTCT TCTCAGGGCT ATTTTTAATC 
CTAGTGGGCT TTGTCGTTCT GGCGATTGTC TATATGTATA TCGCCGACAA GCTACAAACC
AAACAGGCCG TGCGCCACAA CTACCCTGTG ATTGGTCGCT TTCGGTATTT ATTTGAGAAA
CAAGGCGAGT TTTTTAGGCA GTACTTTTTC GCACAGGACA GGGAAGAATT ACCCTTTAAC
CGCGCCGAGC GGAGCTGGGT ATATCGAGCC GCGAAAAACG TCGACAGAAC CATCGCCTTT
GGCTCGACAC GCCCGCTAGA CAGCACGGGT GCCATCATGT TTATGAATAC CGCCTTTCCG
ACTCAAGATG AAGATATTAC GCCAATTCTG CCTCAAACCA TTGGCCCCCA TTGCCGTGAG
CCCTACACAA CTAAGGCCAT TTGCCATATC TCCGCCATGA GTTTCGGCGC CCTATCACGC
CCTGCCGTCA CCGCCTTATC CCACGGCGCA GCACAGGCGG GATGTTGGTT AAATACCGGA
GAAGGTGGCT TAAGCCCTTA CCATTTAAAA GGCGGCTGCG ACTTAGTCTT TCAAATTGGT
ACCGCTAAAT ACGGTGTACG TAATGAGCAC GGCCATTTAG ACGATGACAA GCTTAAAGAA
ATCGCCGCAC ACCCCGAAGT TAAAATGTTT GAAATCAAAA TGAGCCAAGG AGCCAAACCA
GGCAAGGGCG GTATCTTGCC GGGGATAAAA GTCACCGAGG AGATCGCCAA AATTCGCGGT
ATCCCGCAGG GCCATGATTC AATTAGCCCC AATGGTCATA TCGAGTTTAA AAATGTGGGC
GATATTCTGG ATATGATTGC CAGAGTACGT GAGGTCACGG GTAAACCCAC AGGCATTAAA
GCCGTACTTG GGGACGTGCA GTGGCTCGAA GATTTTTGCG ATGAAATTGA GCGCCGTGGC
GAAGCCTCTG CCCCCGACTT TTTTACCTTA GACAGTGCTG ACGGCGGCAC GGGCGCCGCC
CCTCAACCCT TAATGGATTA TGTGGGCTTG CCCCTTAAAG AGAGTTTACC CATATTAGTC
AATATCTTAA TTCAGCGTGG GCTGCGTAAA CGCATTAAAG TGATTGCCTC AGGCAAACTC
ATAGTACCAT CGAGGGTCGC TTGGGCGTTG GCCTTAGGTG CGGATTTTAT CGCCTCGGCC
CGTGGCAATA TGTTTGCCCT CGGATGTATT CAAGCGCTGC AATGCAACAA GGATACCTGT
CCGACGGGTA TCACGACCCA TAATAAGAAG TTGCAGCAAG GTCTTGATCC TAGAGATAAA
TCGACTCGCG TCGCTAGTTA TAATCATAAC CTACACCACG ATTTAGCCCT GATCGCCCAC
TCCTGTGGCG TGACAGAGCC AAGGCAGCTC AAGCCGTCCC ATGTGAGGAT TATGCTCGAG
AGTGGCTTGT CGGTTTCGCT GGATAAGTAC TATTCCCATA TCAATCAATA G
 
Protein sequence
MQELNWFMWG LDLFSGLFLI LVGFVVLAIV YMYIADKLQT KQAVRHNYPV IGRFRYLFEK 
QGEFFRQYFF AQDREELPFN RAERSWVYRA AKNVDRTIAF GSTRPLDSTG AIMFMNTAFP
TQDEDITPIL PQTIGPHCRE PYTTKAICHI SAMSFGALSR PAVTALSHGA AQAGCWLNTG
EGGLSPYHLK GGCDLVFQIG TAKYGVRNEH GHLDDDKLKE IAAHPEVKMF EIKMSQGAKP
GKGGILPGIK VTEEIAKIRG IPQGHDSISP NGHIEFKNVG DILDMIARVR EVTGKPTGIK
AVLGDVQWLE DFCDEIERRG EASAPDFFTL DSADGGTGAA PQPLMDYVGL PLKESLPILV
NILIQRGLRK RIKVIASGKL IVPSRVAWAL ALGADFIASA RGNMFALGCI QALQCNKDTC
PTGITTHNKK LQQGLDPRDK STRVASYNHN LHHDLALIAH SCGVTEPRQL KPSHVRIMLE
SGLSVSLDKY YSHINQ