Gene Shewana3_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3461 
Symbol 
ID4476804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4150670 
End bp4151845 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content50% 
IMG OID639728070 
Productmajor facilitator transporter 
Protein accessionYP_871090 
Protein GI117921898 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.340175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAA AAATTACCCA TAAATATCTC GTAGAAGGCT TGGTTTTTAC CAGTTACGTC 
TTATTTGCAA TGGCATGGGT TGGCGGCACC GCGAGTATGA ATAACATCAT GGCCTCGATG
CATATCGAGA GTTATGCCTC CGCCAGTTTA TTGAGCGGCG CTGTCACCTT AGCCAAAATT
GTCGGCACCT TTGCTGCGGC CTATCTCACC CTCAAATTTG GGGTGAAGTA TGCGTTTTTA
GTCGCGGCGT TATTGATAGT CACAGGCATC ATGACACCCT TCGCTCCAAA CTATGAGTTA
CTGCTGGTGA GCCGCTTTTT AATGGGGCTG GGCGGCGCCT TTATGATTGT CTATTTCAAC
CCGATTGTGA TGCACTGGTT CGCCCCCGAA GAACGCCCAG TGATCAATGG ATTAAACGCG
GTGGCCTTTA ATGTGGGCAC GGCTATCGTG CTTTGGGGTA TGCCGAGCAT CAACGCCATC
AGCGGCGGTT GGCAACAAAG CCTGTTGGTG TTTTCCCTGG CCAGTCTGGT ACTGGCGCTA
CTGTGGTTAT TGGTGAAGTT TGAACAAGCC CCTAGCCATC AAGCCAATGC ACAACAAGAT
AACACCCACT CATACTCCTA TCTCGATGGC TTAAAAGACG GCTTTAACTG GGCCTATGCC
CTCACCTACT CGGGATTATT ATCCTTTTAT ATTTGCCTAT TCACCTTTTA TCCGCAGGCG
GGCATCAGCC AGAGTAAGTG GGTGATTGGT TTTGGGATTG TCGGCACCAT AGCGGGGATA
CTCTACAGCC GTAAACAGCC CCTGCGCCTG CCGATTATTC GCCTCAGCGG CCTGCTTATT
TTCTTGACCG TGTTAGGGCT CTCCTTTGGC ACGGCGCCTT GGCTGCAAAC CCTGTGCGCT
ATCGTCTTAG GCTTTTGCAT CTTTTTACCT GTCACCGCTT TAGTCTCGAT TCCCCACGAG
CTACCTAAGA TGACCAGTCA AAAAATCACA GTGATTTTTA GCCTGTTTTG GTCAATCAGC
TATCTGATTT CGACCTTAGT GCTATGGCTG TTTGGCAAGC TCGTGGATAT CAACCAAGGC
AGTTACTTCG CCTCGTTTGT GCTGATCACC CTATTAAGCG CCACAGTGTT TGTCGGCAGC
TATTTTCTCC CCGAAACCGG ACAAGCTAAG GAGTAA
 
Protein sequence
MPIKITHKYL VEGLVFTSYV LFAMAWVGGT ASMNNIMASM HIESYASASL LSGAVTLAKI 
VGTFAAAYLT LKFGVKYAFL VAALLIVTGI MTPFAPNYEL LLVSRFLMGL GGAFMIVYFN
PIVMHWFAPE ERPVINGLNA VAFNVGTAIV LWGMPSINAI SGGWQQSLLV FSLASLVLAL
LWLLVKFEQA PSHQANAQQD NTHSYSYLDG LKDGFNWAYA LTYSGLLSFY ICLFTFYPQA
GISQSKWVIG FGIVGTIAGI LYSRKQPLRL PIIRLSGLLI FLTVLGLSFG TAPWLQTLCA
IVLGFCIFLP VTALVSIPHE LPKMTSQKIT VIFSLFWSIS YLISTLVLWL FGKLVDINQG
SYFASFVLIT LLSATVFVGS YFLPETGQAK E