| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3359 |
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| Symbol | |
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| ID | 4477660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4030024 |
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| End bp | 4031037 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727969 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_870989 |
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| Protein GI | 117921797 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCG AAACCATCAA CCCCAATGTC AGCCTGCTCG ACAGTGACCA CCAGCAAGTG
AATCTTGGTC GCTGGATGCA TCAATGCGAG TTGATTAAAA GCTATTACAG CGCCACCAGT
GTGTTTGTGC TGCAAATAAC TCAATCTGGT TTTGAAGTGA TAGTCAGCTC AGTGAGCGAA
ACGCCACTCT TTACCTCAGG CACTTTGTTT GCGAGCGACT TTCCCCTGTT TGAACAACTT
AAACATAGTC CAGCGGAAGG AGACTATCTT AATCTCGGCC GTTTTATGCT CGATGAATTG
CCACGGGATT TCGATGGTAT TCAACATATT CTCTCCCGCC CTATAGCTTG GCCCGACGGC
AGCCAATTTG GTTCACTGTG CGTGTTAAAT CCCCATATGG TCGAGCCCGC GAGCAACAGC
GCCATGCTCG AGCCCTTCCA AATTTTGCTT CAGCAGGAAT TATCCCTGTT ATGCCAAAAC
CATCGAATTG AATCCCTATC GATGCGCGAT CAAGAGACCG GCATGCTCAA CCATTACGGT
TTTATGATGA TGGCGCCTAG GCAGCTCAAT CTCGGACGCC GTTTTGGCGC CCACGCAGGA
ATCGTCTTCT TCGAGTTAAC AGAAGCAAAT TCGTCGGAAA ATACTTTAGA AGAGAAACAC
CATAGACTGC TGGGCAATTT GGTCCAAGAT ACTATTCGCA CCGCCGATGT GGCCGCCCAT
TACAGTGAGA CTCAATTTGT GGTGTTAGCT TTCGTCGATA GCGAACGCGA TATATTGCAC
ATAATGAAGC GGGTCGAAAA ACAATTAGAA CAACAAAACC CCCATCTAAA ACTCGATGCC
AGTTACAGCT TCTTTACCCC TGAATCGACG GCCAAGTTAG CGCCCATGAT GGAAGATGCG
CGCTGCAAAC TGAAATCCAT GCAGCCAGAG CCTGAACCAA ACCAAGCAAA TCAAGCGCCC
AAGTTCGATG CCGAGCAGTA TGATAATCCC GCCGCCGACT CGTCCGAGCT CTAG
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| Protein sequence | MLPETINPNV SLLDSDHQQV NLGRWMHQCE LIKSYYSATS VFVLQITQSG FEVIVSSVSE
TPLFTSGTLF ASDFPLFEQL KHSPAEGDYL NLGRFMLDEL PRDFDGIQHI LSRPIAWPDG
SQFGSLCVLN PHMVEPASNS AMLEPFQILL QQELSLLCQN HRIESLSMRD QETGMLNHYG
FMMMAPRQLN LGRRFGAHAG IVFFELTEAN SSENTLEEKH HRLLGNLVQD TIRTADVAAH
YSETQFVVLA FVDSERDILH IMKRVEKQLE QQNPHLKLDA SYSFFTPEST AKLAPMMEDA
RCKLKSMQPE PEPNQANQAP KFDAEQYDNP AADSSEL
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