| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3262 |
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| Symbol | |
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| ID | 4477371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3903663 |
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| End bp | 3904925 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727872 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_870892 |
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| Protein GI | 117921700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.933024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAG ATACCAGCGG CCAGGATAAA GTCCTTGTGC CATCGACCGC TAAACGCCTC
AAGTTGCCTC TGATGATTGG CGGCTGCACC TTACTGGTTA GCGCCTTAGT GTGGGCCAGT
TTTGGTAGCG ATAAAGTCAG CCAGTCCATC AGCCGTAGCG AGCTCACCAC CGCTACTTTA
TATGTTGGCA CGCTCACTCG AGATGTGGCC ACCACGGGCA AAATTGTTGC CGCCAATGCG
CCGATCCTCT ACAGCACCGA AGAAGGCACA GTGACGCTAC TGAGCAACCC AGGGGATAGC
GTCAGCAAGG GTGATGTGGT CGCAAAGCTG GAGAGTCCAA GATTAACCAA TCAATTAGAG
CAGGCCAAAT CGCTATTGGC GGGATTAGAG AGCGCCCTTG AACGTGCCAA GCTAGACGCT
AGACGTAACC AATTACAAGT CAATCAAACC TTAGACATGG CCTCGGTCGA TTTGGAAGCC
GCCGATCGGG AGAGCCGTCG TGGGGATTTA CTGATCCAAT CTAAACTGAT CAGCCAAATC
GACTATGAGA AGGGTAAGGA CGATCTGCAC AAGGCAAAAC TCAAATTTAA GCATGCGGAG
CAGGAAGTGG CCTTAACCAA GGATACCTTA ACCTTTGAGG TGAAAAACAA GGCCTTGGAA
GTTGAGCGGC AGAGTCTGGC GGTAAAAGAG CTTGAGCGTC AGGTCGACGC CTTAAATATC
AAGGCGCCAG TGAGCGGCAT TATTGGTAAC TGGTTGACCG AGCAAAAAAC GCGTTTAAGC
GCTAATCAAC CCATTCTGAC CGTAGTCGAT TTAAGTGCCT ATGAGGCCGA GTTAGCGGTG
CCGGAATCCT ACGCCGACGA GTTAGGACTC GGAATGGAGG TCGAACTGAG CTTCGGTGAA
GTCAAACTCA TGGGCAAACT ATCCTCGATT TCCCCCGAAG TGCGTAACCG TGAGGTGACC
GCCAGAGTGC AATTTGTGCA GAGTGAAAGC TTGAAGCTGC GCCAAAACCA ACGGATCTCC
GCCAGAGTCT TGCTCGAGCA CAGGGCGAAT GTGTTGATGG TTAAACGCGG TGCCTTTATG
ACCAGCGGTG GTGGCGATGA GGTTTACCAA GTCGAAGGCG ATATTGCTAC CCGCCGCGAC
ATTAAGCTCG GCAGTACCAG TATGAGTCTG GTGGAAGTGA TCGAAGGCGG TAAAGCGGGT
GACGAATGGG TGATCTCCAG TGTTGAGCCC TTCAACCATG CCGAACAGGT CAAAATGCAT
TGA
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| Protein sequence | MIKDTSGQDK VLVPSTAKRL KLPLMIGGCT LLVSALVWAS FGSDKVSQSI SRSELTTATL
YVGTLTRDVA TTGKIVAANA PILYSTEEGT VTLLSNPGDS VSKGDVVAKL ESPRLTNQLE
QAKSLLAGLE SALERAKLDA RRNQLQVNQT LDMASVDLEA ADRESRRGDL LIQSKLISQI
DYEKGKDDLH KAKLKFKHAE QEVALTKDTL TFEVKNKALE VERQSLAVKE LERQVDALNI
KAPVSGIIGN WLTEQKTRLS ANQPILTVVD LSAYEAELAV PESYADELGL GMEVELSFGE
VKLMGKLSSI SPEVRNREVT ARVQFVQSES LKLRQNQRIS ARVLLEHRAN VLMVKRGAFM
TSGGGDEVYQ VEGDIATRRD IKLGSTSMSL VEVIEGGKAG DEWVISSVEP FNHAEQVKMH
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