Gene Shewana3_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3234 
Symbol 
ID4477343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3878722 
End bp3879288 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID639727844 
Productheme utilization protein HuvX 
Protein accessionYP_870864 
Protein GI117921672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3721] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00279446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.899142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA CAATCGACAC TGAAATTACA CTCCCGAGCC ATCACACTGA TGCCGACTCG 
CAGTCCATGT TAAGGCAGCG CTTTGTCAGA CAGCCCGATT TAATGCCTGC ACAGTTGGCG
AGTGAATTAG GGATTGCCGA GCTTGATGTG GTCGCGGCAC TGCCGCAAGC GCAGCGGGTG
TTTTTGTCTT TAACGCAAAT CGATGAGCTG CTGCAGAGCT TACCCGAGTG GGGACCTCTG
ACCACGATAG TGATGCTCTC GGGCAGCGTT TTTGAATTTA AAGGTGATTT TCCCCAAGGG
AAATTTGCCC ATGGATATTA CAACCTCTAC AGCAAAGGCG ATGGCCTTCA TGGTCATCTC
AAGCTGGATA ACATGCGAGC GATTGCGTTA ATCAGCAGAC CCTTTAGGGG CAGTGAGAGC
CATTCGATTA ACTTTTTTGG TCCTCAAGGC GAGGTGGTAT TCAAAGTTTA TTTAGGACGA
GACAAGCAAA GAGTGCTTTT TCCTGAGCAA GTTAGCCGTT TTAAAACGCT GGCGAGCACC
TTTGCTACTC AACAGTCACC GATATAA
 
Protein sequence
MTQTIDTEIT LPSHHTDADS QSMLRQRFVR QPDLMPAQLA SELGIAELDV VAALPQAQRV 
FLSLTQIDEL LQSLPEWGPL TTIVMLSGSV FEFKGDFPQG KFAHGYYNLY SKGDGLHGHL
KLDNMRAIAL ISRPFRGSES HSINFFGPQG EVVFKVYLGR DKQRVLFPEQ VSRFKTLAST
FATQQSPI