| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3230 |
|---|
| Symbol | |
|---|
| ID | 4477339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3873280 |
|---|
| End bp | 3874062 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639727840 |
|---|
| Product | methionine aminopeptidase, type I |
|---|
| Protein accession | YP_870860 |
|---|
| Protein GI | 117921668 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.10973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC AGGTGAAGAT AAAATCTGCC GAAGAAATTG CACTGATGCG CCGCGCGGGG
CAATTATTAG CTCAAGTATT TCAAATGCTT GATACCTATG TCCGCCCCGG CATCAGCACC
ATGGATATCA ACGATGCGGT CGAAGCCTTT ATTGTCAATG AGCTAAAATC GCGTCCCGCG
AGTAAAGGTC AGTATGGCTA TCAATATGTG CTGAATTCGT CTATTAACGA GGTGGTCTGC
CATGGTGTGC CCTCGCCGAA TGAGGTCATC AAAAGCAAAG ATATCATTAA CTTAGATATT
ACCCTCGAGA AAGACGGCTA TATTGCCGAC TCCAGTAAAA TGTATGTGAT GCCACAGGCA
CCCGCCGAAG CTAAGAAACT GGCAGATGTT ACCTATCTTG CCATGTGGCA AGGGATCAAA
CAGGTAAAAC CTGGGGCCAC ATTGGGCGAT ATCGGTCATG CGATTCAACA ATATGCCCAA
TCCTTTGGCT ATAGCATTGT CAGAGATTAC TGTGGCCATG GGATAGGTCA AGAAATGCAT
GAAGAGCCAC AAGTCCTTCA CTATGGAAAG CCGAATCAAG GCCTTAAGCT CAAAGCGGGC
ATGGTATTTA CCATTGAGCC CATGGTGAAT CAGGGCACTG AAAAGATAAA GCTCAAAAAA
GATGGTTGGA CGGTTGTCAC CCGCGATAAA AAACTCTCGG CGCAATCGGA ACATACGATA
CTTGTCACCC CAACGGGATA CGAAGTGCTC ACCCTACGCC ACGATGAGCA ATCTCCCCGC
TAA
|
|---|
| Protein sequence | MNNQVKIKSA EEIALMRRAG QLLAQVFQML DTYVRPGIST MDINDAVEAF IVNELKSRPA
SKGQYGYQYV LNSSINEVVC HGVPSPNEVI KSKDIINLDI TLEKDGYIAD SSKMYVMPQA
PAEAKKLADV TYLAMWQGIK QVKPGATLGD IGHAIQQYAQ SFGYSIVRDY CGHGIGQEMH
EEPQVLHYGK PNQGLKLKAG MVFTIEPMVN QGTEKIKLKK DGWTVVTRDK KLSAQSEHTI
LVTPTGYEVL TLRHDEQSPR
|
|---|
| |