Gene Shewana3_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3190 
Symbol 
ID4478253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3828266 
End bp3829111 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID639727800 
Productsulfate ABC transporter, inner membrane subunit CysT 
Protein accessionYP_870820 
Protein GI117921628 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.467306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATTTA ATAATGGGCG CTTACGCCAC AAGCGGGTTT TGCCGGGGTT TAGTATCAGC 
CTAGGTGTGT CTCTGCTGTT TGTCAGCTTG ATCCTCCTGC TCCCCACCAC AGGCCTGATT
ATGCAAACCA GCCAGATGAG CTGGGCCGAG TATTGGGGCG TGATTGCCGA TCCCCGCGTG
CTGGCAAGTT ATAAAGTCAC TATTTTATCT GCACTGGCCG CCTCCCTGTT TAACTGTCTT
TTTGGCCTGT TACTCGCCTG GGTGTTGGTT CGTTATGAGT TTCCGGGTAA GCGCATCCTC
GATGCCTTAG TCGATTTACC CTTTGCCTTA CCCACAGCCG TCGCGGGTAT CACCTTAGCG
ACCCTGTACG CCGAGAATGG CCAGATTGGT AGCCTGTTGG CCGAAATCGG GGTCAAAGTG
GCTTACACAC CATTGGGGAT CGTGGTTGCG ATGATCTTCA CCAGCATTCC CTTCGTGGTG
CGAACCGTCC AGCCCGTACT GGAAGAGTTA TCCCACGATG AAGAAGAAGC TGGCATGACC
TTAGGCGCAA CCGATGGCGC CGTGTTTTGG CGGGTGATTT TACCTTCCCT CTGGCCTGCC
TTAGTGGTCG GTACGGCGCT GTCTTTTACC CGCAGCCTAG GTGAGTTTGG CGCGGTGATT
TTTATCGCAG GCAATATGCC CTACATCAGT GAAATCACCT CCCTGATGAT TTTCGTTCGT
CTACAGGAAT TTGATTTTGC CGGCGCCAGC GCCATTGCCT CCGTTGTACT GCTAACCTCG
CTGTTGCTGC TACTGCTGAT TAACCTGTGG CAGGCGCGTT ATTTACGCCG CATTCACGGC
CGATAA
 
Protein sequence
MIFNNGRLRH KRVLPGFSIS LGVSLLFVSL ILLLPTTGLI MQTSQMSWAE YWGVIADPRV 
LASYKVTILS ALAASLFNCL FGLLLAWVLV RYEFPGKRIL DALVDLPFAL PTAVAGITLA
TLYAENGQIG SLLAEIGVKV AYTPLGIVVA MIFTSIPFVV RTVQPVLEEL SHDEEEAGMT
LGATDGAVFW RVILPSLWPA LVVGTALSFT RSLGEFGAVI FIAGNMPYIS EITSLMIFVR
LQEFDFAGAS AIASVVLLTS LLLLLLINLW QARYLRRIHG R