| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3157 |
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| Symbol | |
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| ID | 4477751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3786365 |
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| End bp | 3787627 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639727761 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_870787 |
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| Protein GI | 117921595 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00178016 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.867021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTAA GGGATAATTT TAAACGTAAA ACCATAGACC GCTTGGACTA TCGCTATCAT
CTATTGCTGC TGATAGTGCC AATAGTATTA TTCGTCTTAC TGTTTGTGTT TAATGCTCCC
ACCGAAGGTT GGACTATTCT GCCGCTGCTG TTTGTCTGTC TTATCTATGT GATTGCCTAC
AGCCTTATTT ATTATCTTCA CCAGGGTCGC TTAACCCGTC TATGGCAACA CTTAGAGCAA
GTGGTGAGCA TTAACGATGC TATTTATGAG CTTGCCCATC TATCGAGCCA GTATAAAAAT
GAACATGCGT TTCTCGATGC ACTGCTGAAT AAAGCCGTTT GCATCATTAA CGGTGCCGAA
ATGGGTAGCA TCATCAAAGT CAACGAAGAG ACCCATAAAC TGCACTTCGA ATCCGTTGTT
GGGCTCGATC TTAACATGCT CAAGCAATTG AATTTTTCCC TCGAGCAGTC CTTCGAATAT
CGGCTCACTA AGGGCAAATG CGACCGCGTG GTAGTAGTGG ATGATATGAA AAACATCAAT
GCCGCCAGTA CGCTCACCGG TGAAGAGCAG CACATCTTGC TCACCGCGGC TAAGCAACCG
ATACGTTCTA CACTCTCAAG CCCAATACGC ATCGATGGCA AACTCTATGG CATGCTTAAT
CTCGACAGTA GTAGTGTCGG TGCCTTTAGT GATTACGACC GCAACCTGGT CTCTATTCTC
ACCCATGAGG CCAGCAATGC GATTGCCCTG TACCAGAAGT CATTGCAAAT CACTAAACTC
GCCAACTTTG ACAACTTAAC CGGACTCTAT AACCGTAAAA ACTTCGAAGA TGCCCTACAA
CATTGGCAAC CTAAGGCTCA TCTAGGCAGC TTTTTGGTGA TTATCGATAT GGATAATCTC
AAGACCATTA ATGATCAGCA TGGGCATCAG GCTGGCGATA TGGCCATTAA GCGAGTAGCT
AATACCATAC TGAGTTATTG GAAGCATAAA GGCATTATCT CGCGCTTCGG GGGGGATGAG
TTTGTCGCCC TCTGCCATGG TCCATTAGAG CTGCTTGAAA GCGATTTGGA TGCTATGCGC
GTCAAGTTAC ACCAAGAGTC ATCCTTAAAT CTTAACTTCA GCGTGGGTAT AGCCGCATAC
GACAATGATT GGGCAAAATC ATTTAAACTG GCAGACCAAG CTATGTATGA GCAAAAACGC
GGTAAGAAGA AAGCGGTAAA AGCACTCGAA GCGATTGCGG CCAATAACCA ATTGGCGCAG
TAG
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| Protein sequence | MKLRDNFKRK TIDRLDYRYH LLLLIVPIVL FVLLFVFNAP TEGWTILPLL FVCLIYVIAY
SLIYYLHQGR LTRLWQHLEQ VVSINDAIYE LAHLSSQYKN EHAFLDALLN KAVCIINGAE
MGSIIKVNEE THKLHFESVV GLDLNMLKQL NFSLEQSFEY RLTKGKCDRV VVVDDMKNIN
AASTLTGEEQ HILLTAAKQP IRSTLSSPIR IDGKLYGMLN LDSSSVGAFS DYDRNLVSIL
THEASNAIAL YQKSLQITKL ANFDNLTGLY NRKNFEDALQ HWQPKAHLGS FLVIIDMDNL
KTINDQHGHQ AGDMAIKRVA NTILSYWKHK GIISRFGGDE FVALCHGPLE LLESDLDAMR
VKLHQESSLN LNFSVGIAAY DNDWAKSFKL ADQAMYEQKR GKKKAVKALE AIAANNQLAQ
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