Gene Shewana3_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2998 
Symbol 
ID4478541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3603699 
End bp3604265 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID639727602 
Producthypothetical protein 
Protein accessionYP_870629 
Protein GI117921437 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.695774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAA AATCACATCA CACTAAAACC CTTAAAGCCA TGACCATGGC GCTGTTGGTC 
GGTTTATCCA GTGCCGCCCA TGCCGGAGCC GAGAGCTTTG CGCCTGGAAC CGCCATCCCC
GAATTTGGTG AAGTGGCTAA GGTCGAAAGC ACCCTTGCGA TCCCTGCGGG GATGAAGTTT
AAGGTGGCAT TCGATATGAG TAAGGCGGCC GATGTCGGCC AAGTGAATCG TCAGCTCGAC
AGCCTTGCCC GTTTTATCAA TATGCACGTG GCTGCTGGCG TTAAAGAAAG CGATATTGAG
CTAGCGATGG TGGTGCATGG CAGTGCCGTT GGCGATTTAG CCGATGATAG CTTTTATGCC
AAGCAACACA ACGGTGCGCA AAACCCCAAT AAAGCCTTAG TGAAAACCTT AGTGGCCCAC
GGGGTGAAGT TTTATATCTG TGGTCAGAGC GCCGCTTATT TTGACTTACA CAACGCCTCT
TTGTTACCGG GTGTCGATAT GGCCCTGTCT GCGATGACGG CCCATGCGAT TCTAGCGCAG
CAAGGATTTA GTCAAAATCC GTTTTAG
 
Protein sequence
MQPKSHHTKT LKAMTMALLV GLSSAAHAGA ESFAPGTAIP EFGEVAKVES TLAIPAGMKF 
KVAFDMSKAA DVGQVNRQLD SLARFINMHV AAGVKESDIE LAMVVHGSAV GDLADDSFYA
KQHNGAQNPN KALVKTLVAH GVKFYICGQS AAYFDLHNAS LLPGVDMALS AMTAHAILAQ
QGFSQNPF