Gene Shewana3_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2981 
Symbol 
ID4478524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3581814 
End bp3582293 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID639727585 
ProductHPP family protein 
Protein accessionYP_870612 
Protein GI117921420 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TAAGCCAACA ACAATTAAAA CCCGCACTGC TCGCCGGCAT AGGCGCCATG 
TTATGTATCA GTGCCCTAGC AAGCTTGGAG CAAATGAGTT CACAACTGTT GTGGCTGATG
GCCCCCTTTG GCGCCACTAT GGTGATTTTA TTTGCCCTTC CCGATAGCCC ATTGGCACAG
CCAAGAAATA TTGTCTGCGG CCACCTACTG ACCAGTTTGA TGGGGCTTAT CATTCTCCAC
AGTGTAGGCG TCTCGCCGCT AACATTAGGG TTGGCAGTGG GGGCGGGAAT CGCATTGATG
ATGCTCACCC ACACAGTGCA TCCTCCAGCG GGAGCAAACC CACTGGTTAT TATGCTGACC
GCACAAGGGT GGGATTTTTT ATATTCGCCA GTCGCCAGTG GTCTAGTGCT GATCCTGTCC
TTTGGCTGGC TGTATCATAA TCTGCTGTGT CGACGCCCCT ATCCGCAGAA ATGGTTTTAA
 
Protein sequence
MKVISQQQLK PALLAGIGAM LCISALASLE QMSSQLLWLM APFGATMVIL FALPDSPLAQ 
PRNIVCGHLL TSLMGLIILH SVGVSPLTLG LAVGAGIALM MLTHTVHPPA GANPLVIMLT
AQGWDFLYSP VASGLVLILS FGWLYHNLLC RRPYPQKWF