Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2981 |
Symbol | |
ID | 4478524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3581814 |
End bp | 3582293 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727585 |
Product | HPP family protein |
Protein accession | YP_870612 |
Protein GI | 117921420 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGA TAAGCCAACA ACAATTAAAA CCCGCACTGC TCGCCGGCAT AGGCGCCATG TTATGTATCA GTGCCCTAGC AAGCTTGGAG CAAATGAGTT CACAACTGTT GTGGCTGATG GCCCCCTTTG GCGCCACTAT GGTGATTTTA TTTGCCCTTC CCGATAGCCC ATTGGCACAG CCAAGAAATA TTGTCTGCGG CCACCTACTG ACCAGTTTGA TGGGGCTTAT CATTCTCCAC AGTGTAGGCG TCTCGCCGCT AACATTAGGG TTGGCAGTGG GGGCGGGAAT CGCATTGATG ATGCTCACCC ACACAGTGCA TCCTCCAGCG GGAGCAAACC CACTGGTTAT TATGCTGACC GCACAAGGGT GGGATTTTTT ATATTCGCCA GTCGCCAGTG GTCTAGTGCT GATCCTGTCC TTTGGCTGGC TGTATCATAA TCTGCTGTGT CGACGCCCCT ATCCGCAGAA ATGGTTTTAA
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Protein sequence | MKVISQQQLK PALLAGIGAM LCISALASLE QMSSQLLWLM APFGATMVIL FALPDSPLAQ PRNIVCGHLL TSLMGLIILH SVGVSPLTLG LAVGAGIALM MLTHTVHPPA GANPLVIMLT AQGWDFLYSP VASGLVLILS FGWLYHNLLC RRPYPQKWF
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